Identification of cis-Regulatory Elements in the Mammalian Genome: The cREMaG Database

Loss of the serum response factor in the dopamine system leads to hyperactivity

(2010) Jan Rodriguez Parkitna et al.   FASEB JOURNAL

The dissection of transcriptional modules regulated by various drugs of abuse in the mouse striatum

(2010) Marcin Piechota et al.   GENOME BIOLOGY

ContDist: a tool for the analysis of quantitative gene and promoter properties

(2009) Michael Hackenberg et al.   BMC BIOINFORMATICS

Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes

(2009) Federico Zambelli et al.   NUCLEIC ACIDS RESEARCH

The FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation

(2009) Hideya Kawaji et al.   GENOME BIOLOGY

Identification of interleukin-1 and interleukin-6-responsive genes in human monocyte-derived macrophages using microarrays

(2008) Jolanta Jura et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Eukaryotic transcription factor binding sites--modeling and integrative search methods

(2008) S. Hannenhalli   BIOINFORMATICS

CORE_TF: a user-friendly interface to identify evolutionary conserved transcription factor binding sites in sets of co-regulated genes

(2008) Matthew S Hestand et al.   BMC BIOINFORMATICS

Weak correlation between sequence conservation in promoter regions and in protein-coding regions of human-mouse orthologous gene pairs

(2008) Hirokazu Chiba et al.   BMC GENOMICS

CREB has a context-dependent role in activity-regulated transcription and maintains neuronal cholesterol homeostasis

(2008) Thomas Lemberger et al.   FASEB JOURNAL

PPAR  and C/EBP factors orchestrate adipocyte biology via adjacent binding on a genome-wide scale

(2008) M. I. Lefterova et al.   GENES & DEVELOPMENT

Conservation analysis predicts in vivo occupancy of glucocorticoid receptor-binding sequences at glucocorticoid-induced genes

(2008) A. Y.-L. So et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA