Prediction of Nucleosome Positioning Based on Transcription Factor Binding Sites

Effects of Alu elements on global nucleosome positioning in the human genome

(2010) Yoshiaki Tanaka et al.   BMC GENOMICS

Oligonucleotide Sequence Motifs as Nucleosome Positioning Signals

(2010) Clayton K. Collings et al.   PLoS One

The impact of nucleosome positioning on the organization of replication origins in eukaryotes

(2009) Shanye Yin et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

nuScore: a web-interface for nucleosome positioning predictions

(2008) M. Y. Tolstorukov et al.   BIOINFORMATICS

Characteristics of Nucleosome Core DNA and Their Applications in Predicting Nucleosome Positions

(2008) Hongde Liu et al.   BIOPHYSICAL JOURNAL

Nucleosome Retention and the Stochastic Nature of Promoter Chromatin Remodeling for Transcription

(2008) Hinrich Boeger et al.   CELL

Two strategies for gene regulation by promoter nucleosomes

(2008) I. Tirosh et al.   GENOME RESEARCH

A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome

(2008) T. N. Mavrich et al.   GENOME RESEARCH

HIV-1 protease cleavage site prediction based on amino acid property

(2008) Bing Niu et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

A Novel Computational Approach To Predict Transcription Factor DNA Binding Preference

(2008) Yudong Cai et al.   JOURNAL OF PROTEOME RESEARCH

Nucleosome organization in the Drosophila genome

(2008) Travis N. Mavrich et al.   NATURE

A novel DNA sequence periodicity decodes nucleosome positioning

(2008) Kaifu Chen et al.   NUCLEIC ACIDS RESEARCH

Genomic Sequence Is Highly Predictive of Local Nucleosome Depletion

(2008) Guo-Cheng Yuan et al.   PLoS Computational Biology

Re-Cracking the Nucleosome Positioning Code

(2008) Mark R Segal   Statistical Applications in Genetics and Molecular Biology

Dynamic Remodeling of Individual Nucleosomes Across a Eukaryotic Genome in Response to Transcriptional Perturbation

(2008) Sushma Shivaswamy et al.   PLOS BIOLOGY

The Insulator Binding Protein CTCF Positions 20 Nucleosomes around Its Binding Sites across the Human Genome

(2008) Yutao Fu et al.   PLoS Genetics