Coexpression network analysis associated with call of rice seedlings for encountering heat stress

Genome-wide identification and analysis of early heat stress responsive genes in rice

(2013) Ki-Hong Jung et al.   JOURNAL OF PLANT BIOLOGY

An Autoregulatory Loop Controlling Arabidopsis HsfA2 Expression: Role of Heat Shock-Induced Alternative Splicing

(2013) J. Liu et al.   PLANT PHYSIOLOGY

Regulation of the heat stress response inArabidopsisby MPK6-targeted phosphorylation of the heat stress factor HsfA2

(2013) Alexandre Evrard et al.   PeerJ

Functional relevance of J-protein family of rice (Oryza sativa)

(2012) Neelam K Sarkar et al.   CELL STRESS & CHAPERONES

Functional analysis of Hsp70 superfamily proteins of rice (Oryza sativa)

(2012) Neelam K. Sarkar et al.   CELL STRESS & CHAPERONES

The SNAC1-targeted gene OsSRO1c modulates stomatal closure and oxidative stress tolerance by regulating hydrogen peroxide in rice

(2012) Jun You et al.   JOURNAL OF EXPERIMENTAL BOTANY

Binding mechanism between Hsp90 and Sgt1 explored by homology modeling and molecular dynamics simulations in rice

(2012) Jun-jie Yan et al.   JOURNAL OF MOLECULAR MODELING

Source-sink dynamics and proteomic reprogramming under elevated night temperature and their impact on rice yield and grain quality

(2012) Wanju Shi et al.   NEW PHYTOLOGIST

RiceFREND: a platform for retrieving coexpressed gene networks in rice

(2012) Yutaka Sato et al.   NUCLEIC ACIDS RESEARCH

Genome-Wide Analyses of Changes in Translation State Caused by Elevated Temperature in Oryza sativa

(2012) Kiyotaka Ueda et al.   PLANT AND CELL PHYSIOLOGY

Unravelling mitochondrial retrograde regulation in the abiotic stress induction of riceALTERNATIVE OXIDASE 1genes

(2012) CHUN-RONG LI et al.   PLANT CELL AND ENVIRONMENT

Posttranscriptional Control of Photosynthetic mRNA Decay under Stress Conditions Requires 3' and 5' Untranslated Regions and Correlates with Differential Polysome Association in Rice

(2012) S.-H. Park et al.   PLANT PHYSIOLOGY

Genome-Wide Transcriptional Profiles during Temperature and Oxidative Stress Reveal Coordinated Expression Patterns and Overlapping Regulons in Rice

(2012) Dheeraj Mittal et al.   PLoS One

Expression Profile in Rice Panicle: Insights into Heat Response Mechanism at Reproductive Stage

(2012) Xianwen Zhang et al.   PLoS One

Genome-wide temporal-spatial gene expression profiling of drought responsiveness in rice

(2011) Di Wang et al.   BMC GENOMICS

A Rice Transmembrane bZIP Transcription Factor, OsbZIP39, Regulates the Endoplasmic Reticulum Stress Response

(2011) Hideyuki Takahashi et al.   PLANT AND CELL PHYSIOLOGY

Enhanced high temperature tolerance in transgenic rice seedlings with elevated levels of alternative oxidase, OsAOX1a

(2011) Yuuki Murakami et al.   Plant Biotechnology

Ca2+-dependent protein kinases and their substrate HsfB2a are differently involved in the heat response signaling pathway in Arabidopsis

(2011) Chidananda Nagamangala Kanchiswamy et al.   Plant Biotechnology

PlaNet: Combined Sequence and Expression Comparisons across Plant Networks Derived from Seven Species

(2011) M. Mutwil et al.   PLANT CELL

Crosstalk between Hsp90 and Hsp70 Chaperones and Heat Stress Transcription Factors in Tomato

(2011) Alexander Hahn et al.   PLANT CELL

Proteomics of rice in response to heat stress and advances in genetic engineering for heat tolerance in rice

(2011) Jie Zou et al.   PLANT CELL REPORTS

Signal transduction by IRE1-mediated splicing of bZIP50 and other stress sensors in the endoplasmic reticulum stress response of rice

(2011) Shimpei Hayashi et al.   PLANT JOURNAL

Identification of the MBF1 heat-response regulon of Arabidopsis thaliana

(2011) Nobuhiro Suzuki et al.   PLANT JOURNAL

Arabidopsis thaliana WRKY25, WRKY26, and WRKY33 coordinate induction of plant thermotolerance

(2011) Shujia Li et al.   PLANTA

Genetic dissection of the biotic stress response using a genome-scale gene network for rice

(2011) I. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plant serine/arginine-rich proteins: roles in precursor messenger RNA splicing, plant development, and stress responses

(2011) Anireddy S. N. Reddy et al.   Wiley Interdisciplinary Reviews-RNA

Arabidopsis DREB2C functions as a transcriptional activator of HsfA3 during the heat stress response

(2010) Huan Chen et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Genome-wide analysis of rice ClpB/HSP100, ClpC and ClpD genes

(2010) Amanjot Singh et al.   BMC GENOMICS

Transcriptional regulatory network triggered by oxidative signals configures the early response mechanisms of japonica rice to chilling stress

(2010) Kil-Young Yun et al.   BMC PLANT BIOLOGY

Photosystem II photochemistry, photoinhibition, and the xanthophyll cycle in heat-stressed rice leaves

(2010) Yan Yin et al.   JOURNAL OF PLANT PHYSIOLOGY

Comprehensive analysis of rice DREB2-type genes that encode transcription factors involved in the expression of abiotic stress-responsive genes

(2010) Satoko Matsukura et al.   MOLECULAR GENETICS AND GENOMICS

Functional characterization of Arabidopsis thaliana WRKY39 in heat stress

(2010) Shujia Li et al.   MOLECULES AND CELLS

Genome-Wide Analyses of Early Translational Responses to Elevated Temperature and High Salinity in Arabidopsis thaliana

(2010) Hideyuki Matsuura et al.   PLANT AND CELL PHYSIOLOGY

Atlas of Rice Grain Filling-Related Metabolism under High Temperature: Joint Analysis of Metabolome and Transcriptome Demonstrated Inhibition of Starch Accumulation and Induction of Amino Acid Accumulation

(2010) Hiromoto Yamakawa et al.   PLANT AND CELL PHYSIOLOGY

Comparative analysis of drought-responsive transcriptome in Indica rice genotypes with contrasting drought tolerance

(2010) Sangram K. Lenka et al.   PLANT BIOTECHNOLOGY JOURNAL

The Association of Multiple Interacting Genes with Specific Phenotypes in Rice Using Gene Coexpression Networks

(2010) Stephen P. Ficklin et al.   PLANT PHYSIOLOGY

Differential metabolic response of cultured rice (Oryza sativa) cells exposed to high- and low-temperature stress

(2010) Chumithri Gayani Gammulla et al.   PROTEOMICS

Chromatin Landscape Dictates HSF Binding to Target DNA Elements

(2010) Michael J. Guertin et al.   PLoS Genetics

Rice sHsp genes: genomic organization and expression profiling under stress and development

(2009) Neelam K Sarkar et al.   BMC GENOMICS

The Cytosolic Protein Response as a Subcomponent of the Wider Heat Shock Response in Arabidopsis

(2009) A. Sugio et al.   PLANT CELL

The Heat Shock Response in Moss Plants Is Regulated by Specific Calcium-Permeable Channels in the Plasma Membrane

(2009) Y. Saidi et al.   PLANT CELL

Orthologs of the Class A4 Heat Shock Transcription Factor HsfA4a Confer Cadmium Tolerance in Wheat and Rice

(2009) D. Shim et al.   PLANT CELL

Heat stress activates phospholipase D and triggers PIP2accumulation at the plasma membrane and nucleus

(2009) Michael Mishkind et al.   PLANT JOURNAL

Arabidopsis ROF1 (FKBP62) modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs

(2009) David Meiri et al.   PLANT JOURNAL

RiceArrayNet: A Database for Correlating Gene Expression from Transcriptome Profiling, and Its Application to the Analysis of Coexpressed Genes in Rice

(2009) T.-H. Lee et al.   PLANT PHYSIOLOGY

Genome-wide survey and expression profiling of heat shock proteins and heat shock factors revealed overlapped and stress specific response under abiotic stresses in rice

(2009) Wenhuo Hu et al.   PLANT SCIENCE

Osiris: an integrated promoter database for Oryza sativa L.

(2008) Robert T. Morris et al.   BIOINFORMATICS

Identifying gene regulatory modules of heat shock response in yeast

(2008) Wei-Sheng Wu et al.   BMC GENOMICS

Heat stress-responsive transcriptome analysis in heat susceptible and tolerant wheat (Triticum aestivum L.) by using Wheat Genome Array

(2008) Dandan Qin et al.   BMC GENOMICS

The Transcriptional Co-activator MBF1c Is a Key Regulator of Thermotolerance inArabidopsis thaliana

(2008) Nobuhiro Suzuki et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Systematic analysis of NPK1-like genes in rice reveals a stress-inducible gene cluster co-localized with a quantitative trait locus of drought resistance

(2008) Jing Ning et al.   MOLECULAR GENETICS AND GENOMICS

Distinctive transcriptome responses to adverse environmental conditions inZea maysL.

(2008) John Fernandes et al.   PLANT BIOTECHNOLOGY JOURNAL

Enhanced heat and drought tolerance in transgenic rice seedlings overexpressing OsWRKY11 under the control of HSP101 promoter

(2008) Xiaolan Wu et al.   PLANT CELL REPORTS

The calmodulin-binding protein kinase 3 is part of heat-shock signal transduction inArabidopsis thaliana

(2008) Hong-Tao Liu et al.   PLANT JOURNAL

Principal Transcriptional Programs Regulating Plant Amino Acid Metabolism in Response to Abiotic Stresses

(2008) H. Less et al.   PLANT PHYSIOLOGY

Chaperone Activity of ERD10 and ERD14, Two Disordered Stress-Related Plant Proteins

(2008) D. Kovacs et al.   PLANT PHYSIOLOGY

A membrane-tethered transcription factor defines a branch of the heat stress response in Arabidopsis thaliana

(2008) H. Gao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA