From immunity to susceptibility: virus resistance induced in tomato by a silenced transgene is lost as TGS overcomes PTGS

Scion on a Stock Producing siRNAs of Potato Spindle Tuber Viroid (PSTVd) Attenuates Accumulation of the Viroid

(2013) Atsushi Kasai et al.   PLoS One

Spatial and functional relationships among Pol V-associated loci, Pol IV-dependent siRNAs, and cytosine methylation in the Arabidopsis epigenome

(2012) A. T. Wierzbicki et al.   GENES & DEVELOPMENT

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

Cell-to-cell and long-distance siRNA movement in plants: mechanisms and biological implications

(2011) Christopher Andrew Brosnan et al.   CURRENT OPINION IN PLANT BIOLOGY

RNA-directed DNA methylation

(2011) Huiming Zhang et al.   CURRENT OPINION IN PLANT BIOLOGY

The epigenetic phenotypes in transgenic Nicotiana benthamiana for CaMV 35S-GFP are mediated by spontaneous transgene silencing

(2011) Seong-Han Sohn et al.   Plant Biotechnology Reports

Graft-Transmitted siRNA Signal from the Root Induces Visual Manifestation of Endogenous Post-Transcriptional Gene Silencing in the Scion

(2011) Atsushi Kasai et al.   PLoS One

Virus-induced gene silencing in plant species

(2011) Y. Shao et al.   RUSSIAN JOURNAL OF PLANT PHYSIOLOGY

Viral suppressors of RNA silencing

(2011) József Burgyán et al.   TRENDS IN PLANT SCIENCE

An endogenous, systemic RNAi pathway in plants

(2010) Patrice Dunoyer et al.   EMBO JOURNAL

Tapping RNA silencing pathways for plant biotechnology

(2010) Alessandra Frizzi et al.   PLANT BIOTECHNOLOGY JOURNAL

Small Silencing RNAs in Plants Are Mobile and Direct Epigenetic Modification in Recipient Cells

(2010) A. Molnar et al.   SCIENCE

Cell Culture-Induced Gradual and Frequent Epigenetic Reprogramming of Invertedly Repeated Tobacco Transgene Epialleles

(2009) K. Krizova et al.   PLANT PHYSIOLOGY

Kismeth: Analyzer of plant methylation states through bisulfite sequencing

(2008) Eyal Gruntman et al.   BMC BIOINFORMATICS

Tandem repeats upstream of the Arabidopsis endogene SDC recruit non-CG DNA methylation and initiate siRNA spreading

(2008) I. R. Henderson et al.   GENES & DEVELOPMENT

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

(2008) Shawn J. Cokus et al.   NATURE

A cautionary note on pathogen-derived sequences

(2008) Alessandra Lucioli et al.   NATURE BIOTECHNOLOGY

NRPD1a and NRPD1b are required to maintain post-transcriptional RNA silencing and RNA-directed DNA methylation in Arabidopsis

(2008) Andrew Eamens et al.   PLANT JOURNAL

Optimized cDNA libraries for virus-induced gene silencing (VIGS) using tobacco rattle virus

(2008) Enwu Liu et al.   Plant Methods