Review
Biotechnology & Applied Microbiology
Serik Eliby, Sara Bekkuzhina, Olena Kishchenko, Gulnur Iskakova, Gulnar Kylyshbayeva, Satyvaldy Jatayev, Kathleen Soole, Peter Langridge, Nikolai Borisjuk, Yuri Shavrukov
Summary: Doubled haploid production is a valuable biotechnology that accelerates the breeding of new wheat varieties and plays important roles in studying genetic control, marker-assisted selection, genomics, and genetic engineering in wheat. This paper reviews recent advances in androgenesis and gynogenesis techniques, with a focus on the in vitro culture phase, and the emerging innovative approaches in researching and producing wheat doubled haploids. The use of CRISPR-based genome editing for inducing doubled haploids in wheat is also discussed.
BIOTECHNOLOGY ADVANCES
(2022)
Article
Plant Sciences
Csaba Lantos, Mihaly Jancso, Arpad Szekely, Eva Nagy, Timea Szaloki, Janos Pauk
Summary: Doubled haploid (DH) plant production, such as anther culture (AC), is a useful tool in modern rice breeding. This study compared the effects of different combinations of plant growth regulators on callus induction in rice, and identified the best combination for in vitro green plant production.
Article
Plant Sciences
Csaba Lantos, Mihaly Jancso, Arpad Szekely, Timea Szaloki, Shoba Venkatanagappa, Janos Pauk
Summary: An efficient protocol for in vitro anther culture in rice breeding, especially for indica genotypes, was evaluated. Three different induction media (N6NDK, N(6)NDZ, Ali-1) and four plant regeneration media (mMSNBK1, MSNBK3, MSNBKZ1, MSNBKZ2) were tested to increase the efficiency of in vitro androgenesis. The production of calli and green plantlets varied among different genotypes and media combinations. Flow cytometric analyses showed that 51.89% of the acclimatized indica rice plantlets had undergone spontaneous chromosome doubling. The utilization of DH plants has been integrated into the Hungarian rice breeding program, and tetraploid lines offer potential for future research and breeding directions.
Review
Biology
Ricardo Mir, Antonio Calabuig-Serna, Jose M. Segui-Simarro
Summary: This review compiles the latest advances in doubled haploid plant production, the application of doubled haploid lines in breeding programs, and future perspectives for alternative technologies for doubled haploid generation in eggplant. Eggplant is globally cultivated for its edible fruit, and breeding programs aim to produce F1 hybrids by crossing highly homozygous pure lines. Doubled haploid individuals can be induced from haploid cells in a single generation, offering a more efficient alternative to traditional self crossing methods.
Article
Plant Sciences
Paul Chege, Erzsebet Kiss, Csaba Lantos, Andrea Palagyi, Janos Pauk
Summary: The study aimed at producing doubled haploids of sorghum successfully from five genotypes, leading to the development of an improved protocol. Temperature and light conditions were found to play a crucial role in the successful process of regeneration and rooting, with sorghum's high tillering ability and abiotic stress tolerance observed to contribute to the attainment of haploid plantlets.
PHYTON-INTERNATIONAL JOURNAL OF EXPERIMENTAL BOTANY
(2021)
Article
Plant Sciences
Samira Tajedini, Baratali Fakheri, Mohsen Niazian, Nafiseh Mahdinezhad, Abdelbagi Mukhtar Ali Ghanim, Ali Kazemi Pour, Ivan Ingelbrecht, Mehran E. Shariatpanahi
Summary: Two different androgenesis pathways, shed-microspore culture (SMC) and anther culture (AC), were developed for haploid induction in mutagenized M-1 rice cultivars. The effects of various factors on induction and regeneration phases were evaluated. The SMC method showed better results in terms of the number of regenerated embryos. Chromosome counting and flow cytometry analysis confirmed the presence of haploid plants, providing a valuable foundation for rice breeding research.
JOURNAL OF PLANT GROWTH REGULATION
(2023)
Article
Forestry
Caixia Liu, Sui Wang, Yi Liu, Meng Wang, Erqin Fan, Chen Liu, Shikai Zhang, Chuanping Yang, Junhui Wang, Heike W. W. Sederoff, Xiangling You, Vincent L. L. Chiang, Su Chen, Ronald R. R. Sederoff, Guanzheng Qu
Summary: In this study, an effective protocol for inducing haploid poplar plants was established, resulting in the successful generation of 96 whole doubled haploid plant lines. The doubled haploid population exhibited significantly higher phenotypic variance compared to the half-sib progeny of the donor tree. Some of the homozygous lines showed excellent potential as model plants for genetic and breeding studies.
JOURNAL OF FORESTRY RESEARCH
(2023)
Review
Biotechnology & Applied Microbiology
Madhu Patial, Ruchi Chauhan, Harinder K. Chaudhary, Kallol K. Pramanick, Arun K. Shukla, Vishnu Kumar, Ramesh P. S. Verma
Summary: The development and improvement of biotechnological tools have greatly contributed to the progress in barley breeding program. The use of doubled haploids has significantly shortened the cultivar development time and has been widely used in various genetic studies. However, challenges such as low efficiency and genotypic specificity still need to be addressed.
CRITICAL REVIEWS IN BIOTECHNOLOGY
(2023)
Article
Genetics & Heredity
Bin Sun, Xiaorui Ding, Junhua Ye, Yuting Dai, Can Cheng, Jihua Zhou, Fuan Niu, Rongjian Tu, Qiyan Hu, Kaizhen Xie, Yue Qiu, Hongyu Li, Zhizun Feng, Chenbing Shao, Liming Cao, Anpeng Zhang, Huangwei Chu
Summary: In this study, a DH population was generated using the AC method in rice breeding. Through single- and two-locus SD analysis, five segregation distortion loci (SDLs) potentially linked to anther culturability were identified. Among these, SDL5 exhibited an overrepresentation of alleles from the female parent, while SDL1.1, SDL1.2, SDL2, and SDL7 displayed an overrepresentation of alleles from the male parent. Additionally, six pairs of epistatic interactions (EPIs) that influenced two-locus SDs in the DH population were discovered. The findings provide insights into the genetic control of anther culturability in rice.
Review
Plant Sciences
Isidre Hooghvorst, Salvador Nogues
Summary: The doubled haploid technique aims to generate pure inbred lines through haploid plant generation and chromosome doubling. Efforts have been focused on haploid production methods such as androgenesis, gynogenesis, and parthenogenesis. Recent interest has been in optimizing chromosome doubling methods to increase rates and efficiency of doubled haploid plant production.
PLANT CELL REPORTS
(2021)
Review
Plant Sciences
Brett Hale, Alison M. R. Ferrie, Sreekala Chellamma, J. Pon Samuel, Gregory C. Phillips
Summary: Androgenesis is widely used in plant breeding programs to redirect cell fate and study cell cycle regulation, meiotic recombination, and embryogenesis. The focus has shifted from protocol development to understanding how protocols work in order to extend their application to other genotypes and species. Transcriptomic and epigenetic analyses have revealed cellular and molecular responses associated with androgenesis, and gene transfer and genome editing technologies show promise for enhancing the genetic composition of microspores used in breeding.
FRONTIERS IN PLANT SCIENCE
(2022)
Article
Agronomy
Ade Mulyana, Bambang S. Purwoko, Iswari S. Dewi, Awang Maharijaya
Summary: Eggplant is a highly produced and valuable vegetable crop. Anther culture is used to produce pure lines for hybrid breeding. This study compared six anther culture methods and found that the Modification 1 method was the most effective in producing in vitro androgenic regenerated plants in eggplant. The ploidy level of regenerants was confirmed using flow cytometry.
Article
Multidisciplinary Sciences
Ramandeep Singh, Ruma Devi, Navraj Kaur Sarao
Summary: Hybrids of cauliflower are in high demand worldwide due to their desirable traits. Traditional hybrid development requires multiple generations of inbreeding, while doubled haploid technology allows for the generation of completely homozygous inbred lines in a single step. A study was conducted to develop a protocol for doubled haploid lines in cauliflower. Different genotypes and media compositions were tested for callus induction and shoot regeneration. Ploidy analysis revealed the presence of haploids, spontaneous doubled haploids, tetraploids, and mixoploids.
Article
Biotechnology & Applied Microbiology
Renata Orlowska
Summary: The study investigates the relationship between copper ions and DNA methylation in triticale regeneration, suggesting that copper ions affect regeneration efficiency through cytosine methylation and may induce mutations.
JOURNAL OF APPLIED GENETICS
(2022)
Article
Multidisciplinary Sciences
Cucu Gunarsih, Bambang Sapta Purwoko, Iswari Saraswati Dewi, Willy Bayuardi Suwarno, Nafisah
Summary: This study aimed to evaluate the anther culture ability and doubled-haploid plants production of F(1) populations derived from indica rice parents with single or multiple abiotic stress tolerance. The results indicated that the F(1) population derived from HS4-11-1-2/B13926E-KA-23 showed higher ability in anther culture compared to other populations. The developed doubled-haploid lines need further evaluation and screening to identify high-yielding and abiotic stress tolerant individuals.
Article
Multidisciplinary Sciences
Mohammed Aizouq, Helga Peisker, Katharina Gutbrod, Michael Melzer, Georg Hoelzl, Peter Doermann
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2020)
Article
Multidisciplinary Sciences
Alevtina Ruban, Thomas Schmutzer, Dan D. Wu, Joerg Fuchs, Anastassia Boudichevskaia, Myroslava Rubtsova, Klaus Pistrick, Michael Melzer, Axel Himmelbach, Veit Schubert, Uwe Scholz, Andreas Houben
NATURE COMMUNICATIONS
(2020)
Article
Plant Sciences
Suresh Tula, Fahimeh Shahinnia, Michael Melzer, Twan Rutten, Rodrigo Gomez, Anabella F. Lodeyro, Nicolaus von Wiren, Nestor Carrillo, Mohammad R. Hajirezaei
FRONTIERS IN PLANT SCIENCE
(2020)
Article
Biochemistry & Molecular Biology
Paula Vicino, Julieta Carrillo, Rodrigo Gomez, Fahimeh Shahinnia, Suresh Tula, Michael Melzer, Twan Rutten, Nestor Carrillo, Mohammad-Reza Hajirezaei, Anabella F. Lodeyro
Summary: Flavodiiron proteins have stress protection activities in plants, and when expressed in chloroplasts, they can increase tolerance to high irradiation, salinity, oxidants, and drought. This could be a novel biotechnological tool for generating stress-tolerant plants.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Article
Plant Sciences
Mingjiu Li, Ganggang Guo, Helene Pidon, Michael Melzer, Alberto R. Prina, Thomas Boerner, Nils Stein
Summary: Utilizing a combination of low-resolution genetic mapping, whole-genome resequencing and comparative functional analyses can help identify candidate genes involved in plastid biology and photosynthesis in crop plants like barley. This approach provides a promising path towards candidate gene identification for mutant genes.
FRONTIERS IN PLANT SCIENCE
(2021)
Article
Biochemistry & Molecular Biology
Katja Witzel, Andrea Matros, Uwe Bertsch, Tariq Aftab, Twan Rutten, Eswarayya Ramireddy, Michael Melzer, Gotthard Kunze, Hans-Peter Mock
Summary: The study identified a protein HvHorcH in barley that contributes to salt stress tolerance and accumulates in the root tip. This discovery may provide a new research direction for understanding how plants adapt to saline environments.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Article
Biotechnology & Applied Microbiology
Aleksandra Muszynska, Andre Guendel, Michael Melzer, Yudelsy Antonia Tandron Moya, Marion S. Roeder, Hardy Rolletschek, Twan Rutten, Eberhard Munz, Gilbert Melz, Stefan Ortleb, Ljudmilla Borisjuk, Andreas Boerner
Summary: The study characterized a rye mutant with high lodging resistance, tall posture, and high biomass production by examining its stem vascular bundles, sclerenchyma composition, and chemical features associated with lodging resistance. The findings suggested that the superior culm stability of the mutant was attributed to a combination of increased vascular bundles, more sclerenchyma, and features like elevated lignin and xylan levels. The mechanical stability and unique culm properties identified in the study may be valuable for breeders seeking to enhance lodging resistance in tall posture cereal crops.
PLANT BIOTECHNOLOGY JOURNAL
(2021)
Article
Plant Sciences
Mingjiu Li, Hannes Ruwe, Michael Melzer, Astrid Junker, Goetz Hensel, Henning Tschiersch, Serena Schwenkert, Sindy Chamas, Christian Schmitz-Linneweber, Thomas Boerner, Nils Stein
Summary: The Arabidopsis gene CIA2 and its paralogous gene CIL encode transcription factors that positively affect the activity of nuclear genes for chloroplast functions and protein import machineries. In addition, it was observed that the CIL gene showed nuclear localization when transiently expressed in Arabidopsis protoplasts.
FRONTIERS IN PLANT SCIENCE
(2021)
Article
Biochemistry & Molecular Biology
Ying Liu, Rodolfo A. Maniero, Ricardo F. H. Giehl, Michael Melzer, Priscille Steensma, Gabriel Krouk, Teresa B. Fitzpatrick, Nicolaus von Wire
Summary: This study found that apoplastic acidification induced by ammonium is associated with iron precipitation and hydrogen peroxide accumulation along the stele in root tips, indicating iron-dependent ROS formation. Through screening ammonium sensitivity in genes, PDX1.1 was identified as an ammonium-responsive gene that is upregulated in the root stele and catalyzes the de novo synthesis of vitamin B-6. Mutants of pdx1.1 exhibit hypersensitivity to ammonium, while chemical complementation or overexpression of PDX1.1 restores root elongation. The synthesis of non-phosphorylated B-6 vitamers mediated by PDX1.1 acts as a primary strategy to protect roots from ammonium-induced ROS formation.
Article
Plant Sciences
Mingjiu Li, Goetz Hensel, Michael Melzer, Astrid Junker, Henning Tschiersch, Hannes Ruwe, Daniel Arend, Jochen Kumlehn, Thomas Boerner, Nils Stein
Summary: Research on barley ohnologous genes ALBOSTRIANS and ALBOSTRIANS-LIKE revealed their involvement in CCT domain proteins, with HvCMF7 related to chloroplast ribosome biogenesis and HvCMF3 mutations leading to delayed seedling development with distinctive leaf color changes.
FRONTIERS IN PLANT SCIENCE
(2021)
Article
Plant Sciences
Leo Bellin, Michael Melzer, Alexander Hilo, Diana Laura Garza Amaya, Isabel Keller, Joerg Meurer, Torsten Moehlmann
Summary: Nucleotide limitation and imbalance in plants have important consequences on metabolism and gene expression. In this study, we investigated the role of two organellar localized enzymes, chloroplast aspartate transcarbamoylase (ATC) and mitochondrial dihydroorotate dehydrogenase (DHODH), in pyrimidine metabolism. Knock-down mutants of ATC showed severe phenotypic effects, including low pyrimidine nucleotide levels, reduced photosynthetic capacity, and altered leaf morphology. DHODH knock-down mutants exhibited impaired seed germination and altered mitochondrial ultrastructure. Our findings suggest that ATC and DHODH play critical roles in nucleotide metabolism and have far-reaching effects on plant growth and development.
PLANT AND CELL PHYSIOLOGY
(2023)
Article
Plant Sciences
Christian Hertig, Twan Rutten, Michael Melzer, Jos H. M. Schippers, Johannes Thiel
Summary: Endosperm development in barley involves the formation of a multinucleate syncytium and subsequent cellularization, leading to the differentiation of endosperm transfer cells (ETCs) and aleurone cells (AL). The positional signaling in the syncytial stage determines the cell identity in the cereal endosperm. This study used morphological analysis and RNA-seq to investigate the developmental and regulatory programs directing cell specification in early endosperm. The results revealed specific characteristics and identified signaling pathways and transcription factors involved in ETC and AL specification.
Article
Plant Sciences
Agata Daszkowska-Golec, Devang Mehta, R. Glen Uhrig, Agnieszka Braszewska, Ondrej Novak, Irene M. Fontana, Michael Melzer, Tomasz Plociniczak, Marek Marzec
Summary: We used a combination of transcriptomics, proteomics, and phytohormonomics analyses to investigate the SL-dependent mechanisms associated with water deficit response in barley. Our research revealed the role of SLs in alleviating the effects of water limitation on plants and identified potential strategies for developing drought-resistant barley.
Letter
Plant Sciences
Mariana Demarchi, Rocio C. Arce, Mabel Campi, Juan J. Pierella Karlusich, Mohammad-Reza Hajirezaei, Michael Melzer, Anabella F. Lodeyro, Raquel L. Chan, Nestor Carrillo
Article
Biochemistry & Molecular Biology
Indira Saado, Khong-Sam Chia, Ruben Betz, Andre Alcantara, Aladar Pettko-Szandtner, Fernando Navarrete, John C. D'Auria, Michael Kolomiets, Michael Melzer, Ivo Feussner, Armin Djamei
Summary: The study shows that the smut fungus Ustilago maydis secretes effector proteins to suppress host defense responses in maize plants, with Rip1 playing a key role in inhibiting host immunity and affecting antioxidant reactions. By relocalizing the host factor ZmLox3, the fungus can partially suppress ROS burst responses in maize plants.