Differential Transcriptomic Analysis by RNA-Seq of GSNO-Responsive Genes Between Arabidopsis Roots and Leaves

Vinyl sulfone silica: application of an open preactivated support to the study of transnitrosylation of plant proteins by S-nitrosoglutathione

(2013) Juan C Begara-Morales et al.   BMC PLANT BIOLOGY

Nitric oxide and reactive oxygen species in plant biotic interactions

(2013) Claudia Scheler et al.   CURRENT OPINION IN PLANT BIOLOGY

Dual regulation of cytosolic ascorbate peroxidase (APX) by tyrosine nitration andS-nitrosylation

(2013) Juan C. Begara-Morales et al.   JOURNAL OF EXPERIMENTAL BOTANY

RNA-Seq analysis discloses early senescence and nucleolar dysfunction triggered by Tdp1α depletion in Medicago truncatula

(2013) Mattia Donà et al.   JOURNAL OF EXPERIMENTAL BOTANY

Protein tyrosine nitration in pea roots during development and senescence

(2013) Juan C. Begara-Morales et al.   JOURNAL OF EXPERIMENTAL BOTANY

Nitro-oxidative stress vs oxidative or nitrosative stress in higher plants

(2013) Francisco J. Corpas et al.   NEW PHYTOLOGIST

CathaCyc, a Metabolic Pathway Database Built from Catharanthus roseus RNA-Seq Data

(2013) Alex Van Moerkercke et al.   PLANT AND CELL PHYSIOLOGY

Analysis of the Alfalfa Root Transcriptome in Response to Salinity Stress

(2013) Olga A. Postnikova et al.   PLANT AND CELL PHYSIOLOGY

Functional study of TCP23 in Arabidopsis thaliana during plant development

(2013) Emilia Balsemão-Pires et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

RNA-Seq: revelation of the messengers

(2013) Marcel C. Van Verk et al.   TRENDS IN PLANT SCIENCE

Effect of nitric oxide on gene transcription – S-nitrosylation of nuclear proteins

(2013) Alexander Mengel et al.   Frontiers in Plant Science

Current overview of S-nitrosoglutathione (GSNO) in higher plants

(2013) Francisco J. Corpas et al.   Frontiers in Plant Science

S-nitrosoglutathione reductases are low-copy number, cysteine-rich proteins in plants that control multiple developmental and defense responses in Arabidopsis

(2013) Shengbao Xu et al.   Frontiers in Plant Science

Cross-talk of nitric oxide and reactive oxygen species in plant programed cell death

(2013) Yiqin Wang et al.   Frontiers in Plant Science

The response and recovery of the Arabidopsis thaliana transcriptome to phosphate starvation

(2012) Jongchan Woo et al.   BMC PLANT BIOLOGY

A sleigh ride through the SNO: regulation of plant immune function by protein S-nitrosylation

(2012) Manda Yu et al.   CURRENT OPINION IN PLANT BIOLOGY

Arsenic triggers the nitric oxide (NO) and S-nitrosoglutathione (GSNO) metabolism in Arabidopsis

(2012) Marina Leterrier et al.   ENVIRONMENTAL POLLUTION

Nitric Oxide-Dependent Posttranslational Modification in Plants: An Update

(2012) Jeremy Astier et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Tyrosine nitration provokes inhibition of sunflower carbonic anhydrase (β-CA) activity under high temperature stress

(2012) Mounira Chaki et al.   NITRIC OXIDE-BIOLOGY AND CHEMISTRY

Proteomic analysis of S-nitrosylated proteins in potato plant

(2012) Hiroaki Kato et al.   PHYSIOLOGIA PLANTARUM

Nitric Oxide Up-Regulates the Expression of Methionine Sulfoxide Reductase Genes in the Intertidal Macroalga Ulva fasciata for High Light Acclimation

(2012) Y.-T. Hsu et al.   PLANT AND CELL PHYSIOLOGY

Arabidopsis Root-Abundant Cytosolic Methionine Sulfoxide Reductase B Genes MsrB7 and MsrB8 are Involved in Tolerance to Oxidative Stress

(2012) Chia-Wen Li et al.   PLANT AND CELL PHYSIOLOGY

Expression Dynamics of the Medicago truncatula Transcriptome during the Symbiotic Interaction with Sinorhizobium meliloti: Which Role for Nitric Oxide?

(2012) A. Boscari et al.   PLANT PHYSIOLOGY

De novo assembled expressed gene catalog of a fast-growing Eucalyptus tree produced by Illumina mRNA-Seq

(2011) Eshchar Mizrachi et al.   BMC GENOMICS

In vivo protein tyrosine nitration in Arabidopsis thaliana

(2011) Jorge Lozano-Juste et al.   JOURNAL OF EXPERIMENTAL BOTANY

Analysis of Arabidopsis JAZ gene expression during Pseudomonas syringae pathogenesis

(2011) AGNES J. DEMIANSKI et al.   MOLECULAR PLANT PATHOLOGY

S-nitrosylation of NADPH oxidase regulates cell death in plant immunity

(2011) Byung-Wook Yun et al.   NATURE

Nitric oxide, reactive nitrogen species and associated enzymes during plant senescence

(2011) Dagmar Procházková et al.   NITRIC OXIDE-BIOLOGY AND CHEMISTRY

Detection and Quantification of S-Nitrosoglutathione (GSNO) in Pepper (Capsicum annuum L.) Plant Organs by LC-ES/MS

(2011) M. Airaki et al.   PLANT AND CELL PHYSIOLOGY

High temperature triggers the metabolism of S-nitrosothiols in sunflower mediating a process of nitrosative stress which provokes the inhibition of ferredoxin-NADP reductase by tyrosine nitration

(2011) MOUNIRA CHAKI et al.   PLANT CELL AND ENVIRONMENT

Metabolism of reactive oxygen species and reactive nitrogen species in pepper (Capsicum annuum L.) plants under low temperature stress

(2011) MORAD AIRAKI et al.   PLANT CELL AND ENVIRONMENT

Nitric oxide imbalance provokes a nitrosative response in plants under abiotic stress

(2011) Francisco J. Corpas et al.   PLANT SCIENCE

S-nitrosylation: An emerging post-translational protein modification in plants

(2011) Jéremy Astier et al.   PLANT SCIENCE

GSNOR-mediated de-nitrosylation in the plant defence response

(2011) Saad I. Malik et al.   PLANT SCIENCE

Mechanical wounding induces a nitrosative stress by down-regulation of GSNO reductase and an increase in S-nitrosothiols in sunflower (Helianthus annuus) seedlings

(2010) Mounira Chaki et al.   JOURNAL OF EXPERIMENTAL BOTANY

Cultured cambial meristematic cells as a source of plant natural products

(2010) Eun-Kyong Lee et al.   NATURE BIOTECHNOLOGY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Regulation of Plant Glycine Decarboxylase by S-Nitrosylation and Glutathionylation

(2010) M. C. Palmieri et al.   PLANT PHYSIOLOGY

Solution structures of the trihelix DNA-binding domains of the wild-type and a phosphomimetic mutant of Arabidopsis GT-1: Mechanism for an increase in DNA-binding affinity through phosphorylation

(2010) Takashi Nagata et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Role of nitric oxide in tolerance of plants to abiotic stress

(2010) Manzer H. Siddiqui et al.   PROTOPLASMA

Functional role of nitric oxide in plants

(2010) Yu. A. Krasylenko et al.   RUSSIAN JOURNAL OF PLANT PHYSIOLOGY

WRKY transcription factors

(2010) Paul J. Rushton et al.   TRENDS IN PLANT SCIENCE

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Computational prediction of novel non-coding RNAs in Arabidopsis thaliana

(2009) Dandan Song et al.   BMC BIOINFORMATICS

NO signals in the hazeNitric oxide signalling in plant defence

(2009) Margit Leitner et al.   CURRENT OPINION IN PLANT BIOLOGY

Reconstruction of Arabidopsis thaliana fully integrated small RNA pathway

(2009) Sadegh Azimzadeh Jamalkandi et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Protein targets of tyrosine nitration in sunflower (Helianthus annuus L.) hypocotyls

(2009) Mounira Chaki et al.   JOURNAL OF EXPERIMENTAL BOTANY

RNA-Seq—quantitative measurement of expression through massively parallel RNA-sequencing

(2009) Brian T. Wilhelm et al.   METHODS

Diverse Transcriptional Programs Associated with Environmental Stress and Hormones in the Arabidopsis Receptor-Like Kinase Gene Family

(2009) Lee Chae et al.   Molecular Plant

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Quantitative measurement of specific biomarkers for protein oxidation, nitration and glycation in Arabidopsis leaves

(2009) Ulrike Bechtold et al.   PLANT JOURNAL

Current view of nitric oxide-responsive genes in plants

(2009) Angélique Besson-Bard et al.   PLANT SCIENCE

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

The methionine sulfoxide reductases: Catalysis and substrate specificities

(2008) Sandrine Boschi-Muller et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

S-Nitrosylation of AtSABP3 Antagonizes the Expression of Plant Immunity

(2008) Yi-Qin Wang et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Noncoding RNA in development

(2008) Paulo P. Amaral et al.   MAMMALIAN GENOME

Expression ofMedicago truncatulaGenes Responsive to Nitric Oxide in Pathogenic and Symbiotic Conditions

(2008) Alberto Ferrarini et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

Transcriptome analysis ofArabidopsisroots treated with signaling compounds: a focus on signal transduction, metabolic regulation and secretion

(2008) Dayakar V. Badri et al.   NEW PHYTOLOGIST

Involvement of Reactive Nitrogen and Oxygen Species (RNS and ROS) in Sunflower–Mildew Interaction

(2008) Mounira Chaki et al.   PLANT AND CELL PHYSIOLOGY

Metabolism of Reactive Nitrogen Species in Pea Plants Under Abiotic Stress Conditions

(2008) F. J. Corpas et al.   PLANT AND CELL PHYSIOLOGY

Modulation of Nitrosative Stress by S-Nitrosoglutathione Reductase Is Critical for Thermotolerance and Plant Growth in Arabidopsis

(2008) U. Lee et al.   PLANT CELL

Nitric oxide modulates ozone-induced cell death, hormone biosynthesis and gene expression in Arabidopsis thaliana

(2008) Reetta Ahlfors et al.   PLANT JOURNAL

A Genome-Wide Functional Investigation into the Roles of Receptor-Like Proteins in Arabidopsis

(2008) G. Wang et al.   PLANT PHYSIOLOGY