MEGANTE: A Web-Based System for Integrated Plant Genome Annotation

Rice Annotation Project Database (RAP-DB): An Integrative and Interactive Database for Rice Genomics

(2013) Hiroaki Sakai et al.   PLANT AND CELL PHYSIOLOGY

The Banana Genome Hub

(2013) Gaëtan Droc et al.   Database-The Journal of Biological Databases and Curation

A beginner's guide to eukaryotic genome annotation

(2012) Mark Yandell et al.   NATURE REVIEWS GENETICS

MIPS PlantsDB: a database framework for comparative plant genome research

(2012) Thomas Nussbaumer et al.   NUCLEIC ACIDS RESEARCH

The International Nucleotide Sequence Database Collaboration

(2012) Y. Nakamura et al.   NUCLEIC ACIDS RESEARCH

The Plant Ontology as a Tool for Comparative Plant Anatomy and Genomic Analyses

(2012) Laurel Cooper et al.   PLANT AND CELL PHYSIOLOGY

TriAnnot: A Versatile and High Performance Pipeline for the Automated Annotation of Plant Genomes

(2012) Philippe Leroy et al.   Frontiers in Plant Science

Sim4db and Leaff: utilities for fast batch spliced alignment and sequence indexing

(2011) Brian Walenz et al.   BIOINFORMATICS

Phytozome: a comparative platform for green plant genomics

(2011) David M. Goodstein et al.   NUCLEIC ACIDS RESEARCH

InterPro in 2011: new developments in the family and domain prediction database

(2011) S. Hunter et al.   NUCLEIC ACIDS RESEARCH

The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools

(2011) Philippe Lamesch et al.   NUCLEIC ACIDS RESEARCH

Database resources of the National Center for Biotechnology Information

(2011) E. W. Sayers et al.   NUCLEIC ACIDS RESEARCH

Rice TOGO Browser: A Platform to Retrieve Integrated Information on Rice Functional and Applied Genomics

(2011) Yoshiaki Nagamura et al.   PLANT AND CELL PHYSIOLOGY

The iPlant Collaborative: Cyberinfrastructure for Plant Biology

(2011) Stephen A. Goff et al.   Frontiers in Plant Science

Efficient Plant Gene Identification Based on Interspecies Mapping of Full-Length cDNAs

(2010) N. Amano et al.   DNA RESEARCH

Gramene database in 2010: updates and extensions

(2010) K. Youens-Clark et al.   NUCLEIC ACIDS RESEARCH

GreenPhylDB v2.0: comparative and functional genomics in plants

(2010) Mathieu Rouard et al.   NUCLEIC ACIDS RESEARCH

The Sol Genomics Network (solgenomics.net): growing tomatoes using Perl

(2010) A. Bombarely et al.   NUCLEIC ACIDS RESEARCH

Megabase Level Sequencing Reveals Contrasted Organization and Evolution Patterns of the Wheat Gene and Transposable Element Spaces

(2010) Frédéric Choulet et al.   PLANT CELL

Fine mapping and candidate gene analysis of ptgms2-1, the photoperiod-thermo-sensitive genic male sterile gene in rice (Oryza sativa L.)

(2010) Jianjun Xu et al.   THEORETICAL AND APPLIED GENETICS

WebGBrowse--a web server for GBrowse

(2009) R. Podicheti et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Fine mapping and candidate gene analysis of a green-revertible albino gene gra(t) in rice

(2009) Tao Chen et al.   Journal of Genetics and Genomics

SALAD database: a motif-based database of protein annotations for plant comparative genomics

(2009) Motohiro Mihara et al.   NUCLEIC ACIDS RESEARCH