Article
Fisheries
Shuang Li, Keyi Fang, Shubing Chen, Jilin Xu, Haimin Chen, Juanjuan Chen
Summary: The study found that carotenoids in Mytilus coruscus mainly occur in the pre-spawning phase, with most carotenoid contents showing similar trends to the dietary microalgae. The hepatopancreas is identified as the main tissue for carotenoid synthesis in Mytilus coruscus. Furthermore, carotenoids containing acetylene groups are selectively assimilated in the gonad, mantle, and muscle.
Review
Biochemistry & Molecular Biology
Shumeng Zhang, Baohua Zou, Peng Cao, Xiaodong Su, Fen Xie, Xiaowei Pan, Mei Li
Summary: Photosynthesis converts solar energy into chemical energy through the utilization of light energy, driving biochemical chains of electron transfers. Structural biology provides insights into the interaction patterns of membrane complexes, soluble electron carrier proteins, and their transient complexes, allowing visualization of different parts of the electron transfer process.
Review
Plant Sciences
Yuanyuan Li, Yue Jian, Yuanyu Mao, Fanliang Meng, Zhiyong Shao, Tonglin Wang, Jirong Zheng, Qiaomei Wang, Lihong Liu
Summary: This review discusses the conserved carotenoid synthesizing and sequestering functions of plastids in plants, as well as their optimization in response to developmental transitions and environmental stimuli. The review analyzes the turbulence and reforming of transcripts, proteins, and metabolic pathways for carotenoid metabolism and storage in different plastid types, using genomics, transcriptomics, proteomics, and metabonomics approaches. Additionally, the coordination between plastid signaling and carotenoid metabolism, as well as the effects of disturbed carotenoid biosynthesis on plastid morphology and function, are also discussed. These omics insights enhance our understanding of the interaction between plastids and carotenoids, and have significant implications for designing strategies for carotenoid-biofortified crops.
FRONTIERS IN PLANT SCIENCE
(2022)
Article
Plant Sciences
Jingwei Yan, Hao Zeng, Weijie Chen, Jiali Luo, Congcong Kong, Heqiang Lou, Jiasheng Wu
Summary: This study analyzed the major carotenoids in Torreya grandis kernels and investigated their regulatory mechanisms. It was found that certain transcription factors positively regulate the expression of specific genes, leading to an increase in carotenoid content. The findings not only contribute to the understanding of carotenoid synthesis in Torreya grandis kernels, but also provide a molecular biology basis for the development of health products rich in carotenoids.
HORTICULTURAL PLANT JOURNAL
(2023)
Article
Spectroscopy
P. Vitek, K. B. Mishra, A. Mishra, B. Vesela, H. Findurova, K. Svobodova, M. Oravec, P. P. Sahu, K. Klem
Summary: Exploring photosynthetic processes via non-invasive means provides additional advantages in phenotyping and precision agriculture. This study used Raman spectroscopy and fluorescence-based methods to investigate the changes in photosynthetic processes and protective mechanisms in Arabidopsis thaliana. The results revealed oxidative damage and depletion of carotenoids under high light conditions, as well as increased accumulation of phenolics. The mutant ros1 showed lower accumulation of anthocyanin compared to the wild-type, supporting the findings from Raman spectroscopy.
SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY
(2022)
Article
Biology
Kimleng Chuon, Jin-Gon Shim, Kun-Wook Kang, Shin-Gyu Cho, Chenda Hour, Seanghun Meas, Ji-Hyun Kim, Ahreum Choi, Kwang-Hwan Jung
Summary: The position of carotenoid in xanthorhodopsin has been elucidated, but the challenging expression of this opsin and the complex biosynthesis of carotenoid in the laboratory have hindered the insightful study of this rhodopsin. This study demonstrated co-expression of Gloeobacter rhodopsin (GR) with a biosynthesized keto-carotenoid targeting the carotenoid binding site, and revealed three crucial features of carotenoid-rhodopsin interaction. The study highlights the critical position of the carotenoid binding site, which allows another protein engineering approach in the microbial rhodopsin family.
COMMUNICATIONS BIOLOGY
(2022)
Article
Chemistry, Physical
Luis A. Zepeda-Ruiz, Alexander Stukowski, Tomas Oppelstrup, Nicolas Bertin, Nathan R. Barton, Rodrigo Freitas, Vasily V. Bulatov
Summary: We demonstrated that crystal rotation leads to the staged hardening of metals, while the basic mechanisms of dislocation behavior remain consistent across all stages of metal hardening.
Article
Plant Sciences
Shugao Fan, Erick Amombo, Sheila Avoga, Yating Li, Yanling Yin
Summary: In this study, the authors used RNA sequencing to analyze miRNAs in bermudagrass genotypes with contrasting salt tolerance. They found that 536 miRNA variants were salt-inducible, with the majority being downregulated in salt-tolerant varieties. They also discovered that miRNA171f targeted genes involved in photosynthesis and improved photosynthetic performance and dry matter accumulation under saline conditions. This study has important implications for breeding crops with enhanced salt tolerance and photosynthetic capacity.
FRONTIERS IN PLANT SCIENCE
(2023)
Article
Microbiology
Changqing Liu, Jin Lei, Min Zhang, Fan Wu, Mingdong Ren, Jinsheng Yang, Qinglong Wu, Xiaoli Shi
Summary: This study investigated the effects of different preservation methods on the community of photosynthetic picoeukaryotes (PPEs) in freshwater lakes. The results showed that cryopreservation with Pluronic F68 (F68) could maintain the abundance and community structure of PPEs over a storage time of 6 months.
MICROBIOLOGY SPECTRUM
(2022)
Article
Biochemistry & Molecular Biology
Junheng Lv, Ruihao Zhang, Yunrong Mo, Huidan Zhou, Mengjuan Li, Rui Wu, Hong Cheng, Mingxian Zhang, Huasu Wang, Wei Hua, Qiaoling Deng, Kai Zhao, Minghua Deng
Summary: Carotenoids are important pigments in pepper fruits, and the composition and content of carotenoid determine the colors of pepper. Transcriptome and metabolome analyses revealed that the expression of structural genes related to carotenoid biosynthesis differed between two pepper cultivars with different colors, resulting in differences in total carotenoid content.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Plant Sciences
Pei Wu, Yadong Ma, Golam Jalal Ahammed, Baoyu Hao, Jingyi Chen, Wenliang Wan, Yanhui Zhao, Huimei Cui, Wei Xu, Jinxia Cui, Huiying Liu
Summary: This study investigates the influence of melatonin on the photosystems of cucumber leaves under low temperature stress. The results show that moderate concentrations of melatonin have a positive effect on the growth of low temperature-stressed cucumber seedlings and improve the performance of active photosystem II and electron transport. Melatonin also affects the activity of photosystem I. However, high concentrations of melatonin have a negative effect on regulating low temperature tolerance in cucumber.
FRONTIERS IN PLANT SCIENCE
(2022)
Review
Immunology
Yewei Yang, Wenbo Lei, Lanhua Zhao, Yating Wen, Zhongyu Li
Summary: Mitochondria play crucial roles in energy production, metabolism, apoptosis, and intrinsic immunity within cells. The infection of Chlamydia, an intracellular bacterium, is closely associated with the host cell mitochondria, affecting mitochondrial fusion and fission to create a favorable environment for Chlamydia replication and growth.
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY
(2022)
Article
Materials Science, Multidisciplinary
Akarsh Verma, Oliver K. Johnson, Gregory B. Thompson, Ian Chesser, Shigenobu Ogata, Eric R. Homer
Summary: This study examines non-Arrhenius grain boundary migration, referred to as antithermal migration, in an incoherent twin & sigma;3 [111] 60 degrees (11 8 5) nickel grain boundary. Molecular dynamics simulations are used to investigate the effect of various factors on migration, and a classical model for grain boundary migration is employed to analyze the results. The findings reveal that the migration mechanisms of the grain boundaries exhibit low apparent barrier heights and show similarities in behavior across different interatomic potentials.
Article
Forestry
Junxiang Liu, Chao Sun, Fei-Fei Zhai, Zhenjian Li, Yongqiang Qian, Lin Gu, Zhenyuan Sun
Summary: The study found significant differences in structure, photosynthetic activity, and protein expression profiles between bark and leaf chloroplasts in Salix matsudana. Bark chloroplasts exhibited lower grana stacks, higher starch levels, and lower oxygen evolution rates compared to leaf chloroplasts. Additionally, key proteins in photosynthesis light reactions were downregulated in bark chloroplasts, while proteins involved in dark reactions showed upregulation, suggesting a potential role of bark chloroplasts in fixing CO2 from malate decarboxylation.
Article
Environmental Sciences
Zhenzhao Xu, Lihou Qin, Guang Zhou, Bilige Siqing, Wenxian Du, Shengwang Meng, Jian Yu, Zhen Sun, Qijing Liu
Summary: This study introduces a high-temporal resolution model to investigate carbon assimilation and sequestration in broad-leaved Korean pine forests. The findings reveal an inverted U-shaped pattern in leaf area dynamics for most tree species in these forests, with shorter leaf drop periods than leaf expansion events. Leaf distribution varies significantly among different canopy heights, with approximately 80% of the leaves above 15 m.
SCIENCE OF THE TOTAL ENVIRONMENT
(2024)
Review
Plant Sciences
Beatriz Fernandez-Marin, Thomas Roach, Amy Verhoeven, Jose Ignacio Garcia-Plazaola
Summary: Xanthophyll cycles play a crucial role in photoprotection and are not limited to excess light conditions but also occur under various abiotic stress conditions, including darkness. The dark-induced formation of zeaxanthin enhances stress tolerance in photosynthetic eukaryotes, yet more research is needed to fully understand the mechanisms and physiological roles of this process.
Article
Plant Sciences
Beatriz Fernandez-Marin, Ana Saenz-Ceniceros, Twinkle Solanki, Thomas Matthew Robson, Jose Ignacio Garcia-Plazaola
Summary: Snowmelt in alpine ecosystems stimulates plant growth by providing water, but strong solar radiation can lead to photodamage. Research comparing the photoprotective strategies of alpine forbs found that snowbed specialists may have stronger photoprotective responses compared to more generalist alpine species.
PHYSIOLOGIA PLANTARUM
(2021)
Article
Biochemistry & Molecular Biology
Shari Van Wittenberghe, Valero Laparra, Jose Ignacio Garcia-Plazaola, Beatriz Fernandez-Marin, Albert Porcar-Castell, Jose Moreno
Summary: Carotenoids play a versatile role in regulating energy flow in plants, particularly through the operation of xanthophyll cycles. This study observed quick antenna adjustments during a dark-to-high-light induction by analyzing absorbance changes and Chla fluorescence in leaves. The results showed complex kinetic behaviors in the 500-600 nm region, indicating a rapid redistribution and relaxation of excitation energy, with implications for the role of antheraxanthin and zeaxanthin.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
(2021)
Article
Plant Sciences
Beatriz Fernandez-Marin, Miren Irati Arzac, Marina Lopez-Pozo, Jose Manuel Laza, Thomas Roach, Matthias Stegner, Gilbert Neuner, Jose Garcia-Plazaola
Summary: The study reveals that the freezing tolerance of fern species is associated with desiccation tolerance, complementary xylem properties, and effective photoprotection mechanisms. Only desiccation-tolerant species are able to tolerate freezing, with an important factor being the properties of the tracheids.
JOURNAL OF EXPERIMENTAL BOTANY
(2021)
Article
Energy & Fuels
Rafael G. Lacalle, Maria T. Gomez-Sagasti, Carlos Garbisu, Jose M. Becerril
Summary: This study investigated the degradation dynamics of commercially-available biodiesel blends in soil polluted with metals, and found that biodiesel had a lower impact on soil health compared to diesel. Soil health was improved when bio-stabilized municipal solid waste was added as organic amendment, enhancing FAME degradation and microbial activity while reducing phytotoxicity.
Article
Plant Sciences
Miquel Nadal, Tim J. Brodribb, Beatriz Fernandez-Marin, Jose I. Garcia-Plazaola, Miren I. Arzac, Marina Lopez-Pozo, Alicia V. Perera-Castro, Javier Gulias, Jaume Flexas, Jill M. Farrant
Summary: The fern Anemia caffrorum produces desiccation tolerant fronds in the dry season and desiccation sensitive fronds in the wet season. This allows for maximizing carbon gain during the rainy season and investing more in protective mechanisms during the hot dry season.
Article
Plant Sciences
Manuel Encinas-Valero, Raquel Esteban, Ana-Maria Heres, Maria Vivas, Dorra Fakhet, Iker Aranjuelo, Alejandro Solla, Gerardo Moreno, Jorge Curiel Yuste
Summary: Climate change and pathogen outbreaks are the main causes of decline in Mediterranean holm oak trees. The study found that declining trees showed increased phenotypic plasticity in their fine root system to optimize soil resource acquisition.
Article
Biodiversity Conservation
Jose Ignacio Garcia-Plazaola, Marina Lopez-Pozo, Beatriz Fernandez-Marin
Summary: The summer climate in Maritime Antarctica is characterized by high humidity, cloudiness, and slightly above zero temperatures, which limit photosynthetic activity and result in plant communities formed by a few species. Research on pigment dynamics in two representative species in Antarctic plant communities revealed high levels of environmental stress.
Article
Biotechnology & Applied Microbiology
June Hidalgo, Mikel Anza, Lur Epelde, Jose M. Becerril, Carlos Garbisu
Summary: The study evaluated the effect of adding zero-valent iron nanoparticles and organic amendments on rhizoremediation of soils contaminated with zinc and lindane, and found that the combination of these two remediation methods can effectively reduce concentrations of organic and metal pollutants, and promote soil health recovery.
ENVIRONMENTAL TECHNOLOGY & INNOVATION
(2022)
Article
Plant Sciences
Jose Ignacio Garcia-Plazaola, Miren Irati Arzac, Laura Brazales, Javier Fernandez, Jose Manuel Laza, Jose Luis Vilas, Marina Lopez-Pozo, Alicia Perera-Castro, Beatriz Fernandez-Marin
Summary: Macroalgal communities in the upper intertidal zone of Antarctica are poor compared to other coastal regions. However, the rhodophyte Pyropia endiviifolia is one of the few species able to colonize this environment successfully. It has better photosynthetic performance and higher tolerance to desiccation and freezing compared to the temperate Atlantic species Porphyra linearis. The study suggests that mechanisms for freezing tolerance may induce higher tolerance to desiccation.
EUROPEAN JOURNAL OF PHYCOLOGY
(2023)
Article
Biochemistry & Molecular Biology
Katya Georgieva, Gergana Mihailova, Beatriz Fernandez-Marin, Gianpaolo Bertazza, Annalisa Govoni, Miren Irati Arzac, Jose Manuel Laza, Jose Luis Vilas, Jose Ignacio Garcia-Plazaola, Francesca Rapparini
Summary: Resurrection plants, such as Haberlea rhodopensis, are able to recover normal metabolic activity after complete dehydration of their leaves. This study investigates the physiological and biochemical changes in H. rhodopensis leaves under cold and freezing temperatures. The results show that leaf water content affects thermodynamical properties during vitrification at low temperatures. Membrane lipid composition, accumulation of sugars, and synthesis of stress-induced proteins were significantly activated during adaptation to cold and freezing temperatures. The freezing tolerance of H. rhodopensis relies on a sucrose/hexoses ratio, which shifts in favor of sucrose upon exposure to freezing temperatures. This study suggests that the accumulation of sugars and upregulation of stress-induced proteins are common responses of H. rhodopensis plants to low temperature and desiccation.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Review
Biology
Ane Legardon, Jose Ignacio Garcia-Plazaola
Summary: In the current era of climate change, plants face challenges of temperature fluctuations and increasing droughts. Gesneriads are a global plant family with many species that can survive long periods with little water and revive upon water availability. Their ability to withstand extreme cold and go through resurrection shares similar metabolic responses. Despite their potential in crop improvement, their difficult cultivation and accessibility hinder their study. This review aims to propose new tentative resurrection gesneriads by identifying common patterns among known resurrection species and gathering metabolic responses to desiccation and freezing stress.
Article
Forestry
Manuel Encinas-Valero, Raquel Esteban, Ana-Maria Heres, Jose Maria Becerril, Jose Ignacio Garcia-Plazaola, Unai Artexe, Maria Vivas, Alejandro Solla, Gerardo Moreno, Jorge Curiel Yuste
Summary: This study investigated the photoprotective responses of holm oak trees under stress and found differential photochemical performance and photoprotective compounds concentration depending on the health status of the trees. Declining trees showed higher energy dissipation yield, lower photochemical efficiency, and enhanced photoprotective compounds. The study also demonstrated that changes in leaf contents can serve as early stress markers for holm oak decline. Therefore, the use of photosynthesis performance indexes and leaf tocopherols concentration as early diagnostic tools can predict declining trends.
Article
Plant Sciences
Albert Porcar-Castell, Zbynek Malenovsky, Troy Magney, Shari Van Wittenberghe, Beatriz Fernandez-Marin, Fabienne Maignan, Yongguang Zhang, Kadmiel Maseyk, Jon Atherton, Loren P. Albert, Thomas Matthew Robson, Feng Zhao, Jose-Ignacio Garcia-Plazaola, Ingo Ensminger, Paulina A. Rajewicz, Steffen Grebe, Mikko Tikkanen, James R. Kellner, Janne A. Ihalainen, Uwe Rascher, Barry Logan
Summary: Remote sensing methods can detect solar-induced chlorophyll a fluorescence. To fully utilize this signal, intensive cross-disciplinary work is required to harmonize biophysical and ecophysiological studies.