A general method to eliminate laboratory induced recombinants during massive, parallel sequencing of cDNA library

Fifteen to Twenty Percent of HIV Substitution Mutations Are Associated with Recombination

(2014) T. E. Schlub et al.   JOURNAL OF VIROLOGY

Host SAMHD1 Protein Promotes HIV-1 Recombination in Macrophages

(2013) Laura A. Nguyen et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Evaluation of a Benchtop HIV Ultradeep Pyrosequencing Drug Resistance Assay in the Clinical Laboratory

(2013) Boaz Avidor et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Identifying Recombination Hot Spots in the HIV-1 Genome

(2013) R. P. Smyth et al.   JOURNAL OF VIROLOGY

Next-Generation Sequencing of HIV-1 RNA Genomes: Determination of Error Rates and Minimizing Artificial Recombination

(2013) Francesca Di Giallonardo et al.   PLoS One

Analysis of 454 sequencing error rate, error sources, and artifact recombination for detection of Low-frequency drug resistance mutations in HIV-1 DNA

(2013) Wei Shao et al.   Retrovirology

Interrelationship between HIV-1 Fitness and Mutation Rate

(2012) Michael J. Dapp et al.   JOURNAL OF MOLECULAR BIOLOGY

Deep Sequencing Reveals Minor Protease Resistance Mutations in Patients Failing a Protease Inhibitor Regimen

(2012) R. Fisher et al.   JOURNAL OF VIROLOGY

Low-Cost Ultra-Wide Genotyping Using Roche/454 Pyrosequencing for Surveillance of HIV Drug Resistance

(2012) Dawn M. Dudley et al.   PLoS One

Reducing chimera formation during PCR amplification to ensure accurate genotyping

(2010) R.P. Smyth et al.   GENE

Accurately Measuring Recombination between Closely Related HIV-1 Genomes

(2010) Timothy E. Schlub et al.   PLoS Computational Biology

5-Azacytidine Can Induce Lethal Mutagenesis in Human Immunodeficiency Virus Type 1

(2009) M. J. Dapp et al.   JOURNAL OF VIROLOGY

High efficiency of HIV-1 genomic RNA packaging and heterozygote formation revealed by single virion analysis

(2009) J. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA