Scaling of Gene Expression with Transcription-Factor Fugacity

The Transcription Factor Titration Effect Dictates Level of Gene Expression

(2014) Robert C. Brewster et al.   CELL

Statistical mechanical model of coupled transcription from multiple promoters due to transcription factor titration

(2014) Mattias Rydenfelt et al.   PHYSICAL REVIEW E

A regulatory role for repeated decoy transcription factor binding sites in target gene expression

(2012) Tek-Hyung Lee et al.   Molecular Systems Biology

Genetic programs constructed from layered logic gates in single cells

(2012) Tae Seok Moon et al.   NATURE

RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more

(2012) Heladia Salgado et al.   NUCLEIC ACIDS RESEARCH

Tuning Promoter Strength through RNA Polymerase Binding Site Design in Escherichia coli

(2012) Robert C. Brewster et al.   PLoS Computational Biology

Measuring Retroactivity from Noise in Gene Regulatory Networks

(2011) Kyung Hyuk Kim et al.   BIOPHYSICAL JOURNAL

Thermodynamic Analysis of Mutant lac Repressors

(2011) Robert Daber et al.   JOURNAL OF MOLECULAR BIOLOGY

Quantitative dissection of the simple repression input-output function

(2011) H. G. Garcia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High-Precision, In Vitro Validation of the Sequestration Mechanism for Generating Ultrasensitive Dose-Response Curves in Regulatory Networks

(2011) Francesco Ricci et al.   PLoS Computational Biology

Modular cell biology: retroactivity and insulation

(2008) Domitilla Del Vecchio et al.   Molecular Systems Biology