Critical bending torque of DNA is a materials parameter independent of local base sequence

Coarse-grained simulations of DNA overstretching

(2013) Flavio Romano et al.   JOURNAL OF CHEMICAL PHYSICS

DNA kinks and bubbles: Temperature dependence of the elastic energy of sharply bent 10-nm-size DNA molecules

(2013) Daniel S. Sanchez et al.   PHYSICAL REVIEW E

Revealing the competition between peeled ssDNA, melting bubbles, and S-DNA during DNA overstretching by single-molecule calorimetry

(2013) X. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rational Design of Allosteric Inhibitors and Activators Using the Population-Shift Model: In Vitro Validation and Application to an Artificial Biosensor

(2012) Francesco Ricci et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

High-energy deformation of filaments with internal structure and localized torque-induced melting of DNA

(2012) Arthur A. Evans et al.   PHYSICAL REVIEW E

Two distinct overstretched DNA structures revealed by single-molecule thermodynamics measurements

(2012) X. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Extreme Bendability of DNA Less than 100 Base Pairs Long Revealed by Single-Molecule Cyclization

(2012) R. Vafabakhsh et al.   SCIENCE

The complete bending energy function for nicked DNA

(2011) Hao Qu et al.   EPL

Critical Torque for Kink Formation in Double-Stranded DNA

(2011) Hao Qu et al.   Physical Review X

The elastic energy of sharply bent nicked DNA

(2010) Hao Qu et al.   EPL

Transition dynamics and selection of the distinct S-DNA and strand unpeeling modes of double helix overstretching

(2010) Hongxia Fu et al.   NUCLEIC ACIDS RESEARCH

Two distinct overstretched DNA states

(2010) Hongxia Fu et al.   NUCLEIC ACIDS RESEARCH

Temperature dependence of DNA persistence length

(2010) Stephanie Geggier et al.   NUCLEIC ACIDS RESEARCH

Sequence dependence of DNA bending rigidity

(2010) S. Geggier et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Elastic Energy Driven Polymerization

(2009) Andrew Wang et al.   BIOPHYSICAL JOURNAL

The flexibility of locally melted DNA

(2009) Robert A. Forties et al.   NUCLEIC ACIDS RESEARCH

Bending modes of DNA directly addressed by cryo-electron microscopy of DNA minicircles

(2009) Davide Demurtas et al.   NUCLEIC ACIDS RESEARCH

Elastic energy of protein-DNA chimeras

(2009) Chiao-Yu Tseng et al.   PHYSICAL REVIEW E

DNA Bending Stiffness on Small Length Scales

(2008) Chongli Yuan et al.   PHYSICAL REVIEW LETTERS