Proton-bound dimers of 1-methylcytosine and its derivatives: vibrational and NMR spectroscopy

Optimizing the Kinetics and Thermodynamics of DNA i-Motif Folding

(2013) Anna Lena Lieblein et al.   CHEMBIOCHEM

Proton-Bridge Motions in Amine Conjugate Acid Ions Having Intramolecular Hydrogen Bonds to Hydroxyl and Amine Groups

(2013) Hou U. Ung et al.   JOURNAL OF PHYSICAL CHEMISTRY A

Visualizing the quadruplex

(2013) Adam Siddiqui-Jain et al.   Nature Chemistry

Quantitative visualization of DNA G-quadruplex structures in human cells

(2013) Giulia Biffi et al.   Nature Chemistry

COHCAP: an integrative genomic pipeline for single-nucleotide resolution DNA methylation analysis

(2013) Charles D. Warden et al.   NUCLEIC ACIDS RESEARCH

G-quadruplex structures are stable and detectable in human genomic DNA

(2013) Enid Yi Ni Lam et al.   Nature Communications

The Nature of Hydrogen Bonds in Cytidine⋅⋅⋅H+⋅⋅⋅Cytidine DNA Base Pairs

(2012) Anna Lena Lieblein et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

I-Motif formation in gene promoters: unusually stable formation in sequences complementary to known G-quadruplexes

(2012) John A. Brazier et al.   CHEMICAL COMMUNICATIONS

Update 1 of: Strong Ionic Hydrogen Bonds

(2012) Michael Meot-Ner (Mautner)   CHEMICAL REVIEWS

Cytosine Derivatives Form Hemiprotonated Dimers in Solution and the Gas Phase

(2012) Aaron R. Moehlig et al.   ORGANIC LETTERS

Time-Resolved NMR Spectroscopic Studies of DNA i-Motif Folding Reveal Kinetic Partitioning

(2011) Anna Lena Lieblein et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Infrared multiple photon dissociation spectroscopy of trapped ions

(2011) Nick C. Polfer   CHEMICAL SOCIETY REVIEWS

Vibrations of a chelated proton in a protonated tertiary diamine

(2011) Gregory J. O. Beran et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Making sense of G-quadruplex and i-motif functions in oncogene promoters

(2010) Tracy A. Brooks et al.   FEBS Journal

Isotope dependent, temperature regulated, energy repartitioning in a low-barrier, short-strong hydrogen bonded cluster

(2010) Xiaohu Li et al.   JOURNAL OF CHEMICAL PHYSICS

Cytosine−Cytosinium Dimer Behavior in a Cocrystal with a Decavanadate Anion as a Function of the Temperature

(2010) Nada Bošnjaković-Pavlović et al.   JOURNAL OF PHYSICAL CHEMISTRY A

Infrared Multiple Photon Dissociation (IRMPD) Spectroscopy of the Proton-Bound Dimer of 1-Methylcytosine in the Gas Phase

(2010) Jos Oomens et al.   Journal of Physical Chemistry Letters

Coexistence of an ILPR i-Motif and a Partially Folded Structure with Comparable Mechanical Stability Revealed at the Single-Molecule Level

(2010) Soma Dhakal et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Vacuum-ultraviolet circular dichroism spectroscopy of DNA: a valuable tool to elucidate topology and electronic coupling in DNA

(2010) Anne Ivalu Sander Holm et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

I-Motif Structures Formed in the Human c-MYC Promoter Are Highly Dynamic–Insights into Sequence Redundancy and I-Motif Stability

(2010) Jixun Dai et al.   PLoS One

Electronic Properties of a Cytosine Decavanadate: Toward a Better Understanding of Chemical and Biological Properties of Decavanadates

(2009) Nada Bošnjaković-Pavlović et al.   INORGANIC CHEMISTRY

Tautomerism of cytosine probed by gas phase IR spectroscopy

(2009) Joost M. Bakker et al.   INTERNATIONAL JOURNAL OF MASS SPECTROMETRY

Vibrational Spectra of Small Protonated Peptides from Finite Temperature MD Simulations and IRMPD Spectroscopy

(2009) A. Cimas et al.   Journal of Chemical Theory and Computation

The Importance of Negative Superhelicity in Inducing the Formation of G-Quadruplex and i-Motif Structures in the c-Myc Promoter: Implications for Drug Targeting and Control of Gene Expression

(2009) Daekyu Sun et al.   JOURNAL OF MEDICINAL CHEMISTRY

The Structure of the Protonated Adenine Dimer by Infrared Multiple Photon Dissociation Spectroscopy and Electronic Structure Calculations

(2009) Khadijeh Rajabi et al.   JOURNAL OF PHYSICAL CHEMISTRY A

A Direct and Nondestructive Approach To Determine the Folding Structure of the I-Motif DNA Secondary Structure by NMR

(2009) Jixun Dai et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

The i-Motif in thebcl-2P1 Promoter Forms an Unexpectedly Stable Structure with a Unique 8:5:7 Loop Folding Pattern

(2009) Samantha Kendrick et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Insights from first principles molecular dynamics studies toward infrared multiple-photon and single-photon action spectroscopy: Case study of the proton-bound dimethyl ether dimer

(2008) Xiaohu Li et al.   JOURNAL OF CHEMICAL PHYSICS

Exploration of charge-transfer complexes of a nucleobase: Crystal structure and properties of cytosine–Et2TCNQ salt

(2008) Tsuyoshi Murata et al.   SOLID STATE SCIENCES