4.6 Article

Optimal control of molecular fragmentation with homologous families of photonic reagents and chemical substrates

Journal

PHYSICAL CHEMISTRY CHEMICAL PHYSICS
Volume 15, Issue 41, Pages 18012-18022

Publisher

ROYAL SOC CHEMISTRY
DOI: 10.1039/c3cp52664j

Keywords

-

Funding

  1. NSF [CHE-0718610]
  2. DOE [DE-FG02-02ER15344]
  3. Direct For Mathematical & Physical Scien
  4. Division Of Chemistry [1058644] Funding Source: National Science Foundation

Ask authors/readers for more resources

This work investigates laser optimally controlled fragmentation in a series of chemically related halomethane compounds in order to determine the extent to which regular trends in objective yields are observed upon variation of both the laser pulse shape and the chemical substrate. Three control objectives defined by ratios of fragment ions were considered, where families of shaped pulses were found that produced optimal objective yields. For the objective defined by the ratio of a halogen ion to a methyl halide ion, a systematic correlation between the optimal objective yield and chemical composition was revealed. Furthermore, some of the optimal shaped pulses were found to successfully control the same objective in closely related molecular substrates. These results provide a basis to expect systematic chemical responses from optimally shaped laser pulses acting as photonic reagents'' in analogy with the action of traditional chemical reagents.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.6
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Chemistry, Physical

Ultrafast Dynamics of Nitro-Nitrite Rearrangement and Dissociation in Nitromethane Cation

Mi'Kayla D. Word, Hugo A. Lopez Pena, Derrick Ampadu Boateng, Shane L. McPherson, Gennady L. Gutsev, Lavrenty G. Gutsev, Ka Un Lao, Katharine Moore Tibbetts

Summary: This study presents new insights into the ultrafast rearrangement and dissociation dynamics of nitromethane cation. The findings demonstrate the occurrence of the roaming nitro-nitrite rearrangement (NNR) pathway in the electronically excited state of NM+, which provides the necessary energy for subsequent dissociation. The results from pump-probe measurements and molecular dynamics simulations support the completion of NNR within 500 fs followed by dissociation into NO+ and OCH3.

JOURNAL OF PHYSICAL CHEMISTRY A (2022)

Article Chemistry, Physical

Mechanisms of Complete Dissociation of CO2 on Iron Clusters

Gennady L. Gutsev, Katharine M. Tibbetts, Lavrenty G. Gutsev, Sergey M. Aldoshin, Bala R. Ramachandran

Summary: The dissociation of CO2 on iron clusters was studied using density functional theory and basis sets. It was found that the spin magnetic moments of the isomers were often quenched compared to the initial reagents. The dissociation pathways contained several transition states and local minima, and the locations of spin flips were still uncertain. Two dissociation pathways were obtained for each reaction, and the Fe-2+CO2 reaction was found to be endothermic while the Fe-4+CO2 and Fe-16+CO2 reactions were exothermic. Reduction of CO2 was more favorable than its complete dissociation in the Fe-4 case.

CHEMPHYSCHEM (2022)

Article Biochemistry & Molecular Biology

Conformer-Specific Dissociation Dynamics in Dimethyl Methylphosphonate Radical Cation

Vaibhav Singh, Hugo A. Lopez Pena, Jacob M. Shusterman, Patricia Vindel-Zandbergen, Katharine Moore Tibbetts, Spiridoula Matsika

Summary: The dynamics of DMMP radical cation after strong field adiabatic ionization has been studied using a combination of experimental and computational methods. The pump-probe experiments show coherent oscillations of the parent ion yield, while the yields of two fragments oscillate with a slight phase shift. The computational results and experimental observations reveal that DMMP exists in two conformations and exhibits different dissociation products when excited to higher electronic states.

MOLECULES (2022)

Review Physics, Multidisciplinary

Generation of nanomaterials by reactive laser-synthesis in liquid

Laysa M. Frias Batista, Ashish Nag, Victoria K. Meader, Katharine Moore Tibbetts

Summary: Nanomaterials with tailored structures and surface chemistry are in high demand for their applications in various fields. Laser-synthesis techniques, particularly laser ablation in liquid (LAL), have attracted attention for their potential in producing unique nanomaterials. This review focuses on the emerging reactive laser-synthesis methods and their chemical reaction mechanisms, providing guidance for researchers interested in designing novel nanomaterial production.

SCIENCE CHINA-PHYSICS MECHANICS & ASTRONOMY (2022)

Article Chemistry, Multidisciplinary

Coherent Control of Molecular Dissociation by Selective Excitation of Nuclear Wave Packets

Hugo A. Lopez Pena, Jacob M. Shusterman, Derrick Ampadu Boateng, Ka Un Lao, Katharine Moore Tibbetts

Summary: This study reports on pump-probe control schemes to manipulate fragmentation product yields in p-nitrotoluene cation. The results demonstrate that strong field ionization induces multimode coherent excitation and that the vibrational wave packets can be excited with specific photon energies at different points on their potential energy surfaces to induce selective fragmentation.

FRONTIERS IN CHEMISTRY (2022)

Review Automation & Control Systems

The optimization landscape of hybrid quantum-classical algorithms: From quantum control to NISQ applications

Xiaozhen Ge, Re-Bing Wu, Herschel Rabitz

Summary: This review explores the landscapes of hybrid quantum-classical optimization algorithms prevalent in rapidly developing quantum technologies. It discusses how the objective function is computed by a quantum system while the optimizer is classical. The review shows that the landscape's geometry undergoes morphological changes from trap-free to rugged landscapes, eventually leading to barren-plateau landscapes where the optimizer can hardly move. This unified view is crucial for understanding different systems and finding ways to avoid traps or plateaus.

ANNUAL REVIEWS IN CONTROL (2022)

Article Biochemistry & Molecular Biology

Interdiction in the Early Folding of the p53 DNA-Binding Domain Leads to Its Amyloid-Like Misfolding

Fernando Bergasa-Caceres, Herschel A. Rabitz

Summary: This article investigates the initial contact formation events along the folding pathway of the DNA-binding domain of p53 and the intermolecular events leading to its conversion into a prion-like form upon incubation with peptide P8(250-257). The calculations employ the sequential collapse model (SCM) to identify the segments involved in the initial contacts formation. Experimental evidence shows that the incubation of p53 with peptide P8(250-257) leads to an amyloid conformational transition. The findings suggest that disrupted initial contacts and enhanced folding through less stable contacts may contribute to core p53 amyloid misfolding.

MOLECULES (2022)

Article Chemistry, Physical

Heterogeneous to homogeneous Cu-Ag nanoparticles by laser reduction in liquid

Ashis Nag, Christopher M. Nguyen, Katharine Moore Tibbetts

Summary: This study reports a method for synthesizing Cu-Ag nanoparticles with tunable compositions and structures using femtosecond laser reduction in liquid. The synthesized nanoparticles can exhibit special structures or homogeneous alloy structures, depending on the precursor concentration, and their elemental compositions are consistent with the precursor ratios.

APPLIED SURFACE SCIENCE (2023)

Article Chemistry, Physical

The Surprising Ease of Finding Optimal Solutions for Controlling Nonlinear Phenomena in Quantum and Classical Complex Systems

Herschel Rabitz, Benjamin Russell, Tak-San Ho

Summary: This Perspective explores the surprising ease of achieving optimal control of nonlinear phenomena in quantum and classical complex systems. It proposes a unified explanation based on the concept of control landscapes, where the same set of three underlying assumptions apply. Despite the high dimensionality of control variables, relatively short searches are typically required.

JOURNAL OF PHYSICAL CHEMISTRY A (2023)

Article Mechanics

Chemically sensitive fluorescence imaging of colliding microdroplets

Zachary Quine, Alexei Goun, Francois Laforge, Herschel Rabitz, Chung K. Law

Summary: We propose a simple optical method for generating chemical concentration maps of mixing fluids using a chemically sensitive dye. This method detects the dye through planar laser induced fluorescence. We demonstrate the application of this method by investigating the collision and mixing of two microdroplets composed of different fluids.

PHYSICS OF FLUIDS (2023)

Article Chemistry, Physical

Nitrogen Reduction to Ammonia on a Fe16 Nanocluster: A Computational Study of Catalysis

Gennady L. Gutsev, Katharine M. Tibbetts, Lavrenty G. Gutsev, Sergey M. Aldoshin, Bala R. Ramachandran

Summary: This study investigates the process of reductive ammonia formation from N-2 and H-2 catalyzed by a Fe-16 cluster using density functional theory. The study examines the binding and dissociation of N-2 to Fe-16, as well as the pathways leading to the formation of an amino group. Furthermore, the pathways leading to NH3 formation are explored, and two detachment mechanisms are discovered.

JOURNAL OF PHYSICAL CHEMISTRY A (2023)

Article Chemistry, Physical

How Pulse Width Affects Laser Ablation of Organic Liquids

Laysa M. Frias M. Batista, Ella Kaplan, Chamari Weththasingha, Benjamin Cook, Samuel Harris, Ashish Nag, Katharine Moore Tibbetts

Summary: This research investigates the laser ablation process of neat organic liquids and its impacts on reaction kinetics and product distributions. The results show that increasing the pulse width affects the formation of solvent molecule dimers and oxidized molecules, while enhancing the production of gaseous molecules, sp-hybridized carbons, and fluorescent carbon dots. The observed trends can be explained by established ionization mechanisms and cavitation bubble dynamical processes. These findings have important implications for controlling carbon shell formation and direct production of carbon nanomaterials.

JOURNAL OF PHYSICAL CHEMISTRY B (2023)

Article Engineering, Industrial

Kernel-based global sensitivity analysis obtained from a single data set

John Barr, Herschel Rabitz

Summary: This paper presents a new kernel-based global sensitivity analysis (GSA) tool for single input-output data sets, with three key advances: (1) a new numerical estimator that shows empirical improvement over previous procedures; (2) a computational method for generating inner statistical functions from a single data set; (3) a theoretical extension defining conditional sensitivity indices for capturing shared information about the output when input-input correlations exist. Utilizing these indices, a decomposition of output uncertainty based on optimal learning sequence of input variables is derived, remaining consistent with input correlations. The new methodology is validated on benchmark systems, providing valuable insights.

RELIABILITY ENGINEERING & SYSTEM SAFETY (2023)

Article Chemistry, Physical

Understanding photochemical pathways of laser-induced metal ion reduction through byproduct analysis

Laysa M. Frias Batista, Michael Moody, Chamari Weththasingha, Ella Kaplan, Irtiza Faruque, M. Samy El-Shall, Katharine Moore Tibbetts

Summary: Laser-induced reduction of metal ions is a sustainable route to ligand-free metal nanoparticles. This study investigates the photochemical reactions involved in the reduction of Ag+ and [AuCl4](-) using nanosecond and femtosecond lasers. The results provide mechanistic insights that can inform the design of laser synthesis procedures to improve control over metal nanoparticle properties and enhance byproduct yields.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2023)

Article Chemistry, Analytical

Experimental and Theoretical Analysis of Tricyclic Antidepressants by Ultraviolet Picosecond Laser Desorption Post-Ionization Mass Spectrometry

Teodora Zagorac, Hugo Andres Lopez Pena, Jason M. Gross, Katharine Moore Tibbetts, Luke Hanley

Summary: This study examines the use of ultraviolet picosecond laser desorption postionization (ps-LDPI-MS) for the detection of tricyclic antidepressants. The results show that 213nm ps-LDPI-MS has less fragmentation than other methods. The ionization energies of the compounds are predicted using density functional theory calculations.

ANALYTICAL CHEMISTRY (2023)

Article Chemistry, Physical

Effect of a single methyl substituent on the electronic structure of cobaltocene studied by computationally assisted MATI spectroscopy

Sergey Yu. Ketkov, Sheng-Yuan Tzeng, Elena A. Rychagova, Anton N. Lukoyanov, Wen-Bih Tzeng

Summary: Metallocenes, including methylcobaltocene, play important roles in various fields of chemistry. The ionization energy and vibrational structure of (Cp ')(Cp)Co can be influenced by introducing methyl substituents. The mass-analyzed threshold ionization spectrum and DFT calculations provide accurate information about the properties and transformations of (Cp ')(Cp)Co.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2024)

Review Chemistry, Physical

Polymer mechanochemistry: from single molecule to bulk material

Qifeng Mu, Jian Hu

Summary: Polymer mechanochemistry has experienced a renaissance due to the rapid development of mechanophores and principles governing mechanochemical transduction or material strengthening. It has not only provided fundamental guidelines for converting mechanical energy into chemical output, but also found applications in engineering and smart devices.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2024)

Article Chemistry, Physical

Complex oiling-out behavior of procaine with stable and metastable liquid phases

Da Hye Yang, Francesco Ricci, Fredrik L. Nordstrom, Na Li

Summary: Through systematic evaluation of the oiling-out behavior of procaine, we identified both stable and metastable liquid-liquid phase separation, and established phase diagrams to assist in rational selection of crystallization strategies.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2024)

Article Chemistry, Physical

Breaking the size constraint for nano cages using annular patchy particles

Vikki Anand Varma, Simmie Jaglan, Mohd Yasir Khan, Sujin B. Babu

Summary: Designing engineering structures like nanocages, shells, and containers through self-assembly of colloids is a challenging problem. This work proposes a simple model for the subunit, which leads to the formation of monodispersed spherical cages or containers. The model with only one control parameter can be used to design cages with the desired radius.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2024)

Article Chemistry, Physical

Effect of the charge rate on the mechanical response of composite graphite electrodes: in situ experiment and mathematical analysis

Hainan Jiang, Yaolong He, Xiaolin Li, Zhiyao Jin, Huijie Yu, Dawei Li

Summary: The cycling lifespan and coulombic efficiency of lithium-ion batteries are crucial for high C-rate applications. The Li-ion concentration plays a crucial role in determining the mechanical integrity and structural stability of electrodes. This study focuses on graphite as the working electrode and establishes an experimental system to investigate the mechanical properties of composite graphite electrode at different C-rates. Considering the effect of Li-ion concentration in stress analysis is found to be significant.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2024)

Article Chemistry, Physical

The effect of weak π-π interactions on single-molecule electron transport properties of the tetraphenylethene molecule and its derivatives: a first-principles study

Zhiye Wang, Yunchuan Li, Mingjun Sun

Summary: This study investigates the influence of intramolecular pi-pi interactions on the electronic transport capabilities of molecules. By designing and analyzing three pi-conjugated molecules, the researchers observe that different pi-conjugated structures have varying effects on electron transport. The findings provide a theoretical foundation for designing single-molecule electronic devices with multiple electron channels based on intramolecular pi-pi interactions.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2024)

Article Chemistry, Physical

Designed fabrication of MoS2 hollow structures with different geometries and the comparative investigation toward capacitive properties

Yuandong Xu, Haoyang Feng, Chaoyang Dong, Yuqing Yang, Meng Zhou, Yajun Wei, Hui Guo, Yaqing Wei, Jishan Su, Yingying Ben, Xia Zhang

Summary: Hollow MoS2 cubes and spheres were successfully synthesized using a one-step hydrothermal method with the hard template method. The hollow MoS2 cubes exhibited higher specific capacitance and energy density compared to the hollow MoS2 spheres. The symmetrical supercapacitors assembled with these hollow structures showed good performance and high capacity retention after multiple cycles. These findings suggest that controlling the pore structure and surface characteristics of MoS2 is crucial for enhancing its electrochemical properties.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2024)

Article Chemistry, Physical

Exploiting the photophysical features of DMAN template in ITQ-51 zeotype in the search for FRET energy transfer

Ainhoa Oliden-Sanchez, Rebeca Sola-Llano, Joaquin Perez-Pariente, Luis Gomez-Hortiguela, Virginia Martinez-Martinez

Summary: The combination of photoactive molecules and inorganic structures is important for the development of advanced materials in optics. In this study, bulky dyes were successfully encapsulated in a zeolitic framework, resulting in emission throughout the visible spectrum.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2024)

Article Chemistry, Physical

Insights into the multi-functional lithium difluoro(oxalate)borate additive in boosting the Li-ion reaction kinetics for Li3VO4 anodes

Miaomiao Zhang, Cunyuan Pei, Qiqi Xiang, Lintao Liu, Zhongxu Dai, Huijuan Ma, Shibing Ni

Summary: The design of a solid electrolyte interphase (SEI) plays a crucial role in improving the electrochemical performance of anode materials. In this study, lithium difluoro(oxalate)borate (LiDFOB) is used as an electrolyte additive to form a protective SEI film on Li3VO4 (LVO) anodes. The addition of LiDFOB results in a dense, uniform, stable, and LiF-richer SEI, which enhances the Li-ion storage kinetics. The generated SEI also prevents further decomposition of the electrolyte and maintains the morphology of LVO anodes during charge/discharge processes. This work demonstrates the effectiveness of LiDFOB as a multi-functional additive for LiPF6 electrolytes and provides insights into SEI construction for high-performance LVO anodes.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2024)

Article Chemistry, Physical

New insights into the structure of the Ag(111)-p(4 x 4)-O phase: high-resolution STM and DFT study

B. V. Andryushechkin, T. V. Pavlova, V. M. Shevlyuga

Summary: The atomic structure of the Ag(111)-p(4 x 4)-O phase was reexamined and two phases with the same periodicity were discovered. It was demonstrated that the accepted Ag6 model is incompatible with high-resolution oxygen-sensitive STM images.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2024)

Article Chemistry, Physical

ClO-driven degradation of graphene oxide: new insights from DFT calculations

S. L. Romo-Avila, D. Marquez-Ruiz, R. A. Guirado-Lopez

Summary: In this study, we used density functional theory (DFT) calculations to investigate the interaction between model graphene oxide (GO) nanostructures and chlorine monoxide ClO. We aimed to understand the role of this highly oxidizing species in breaking C-C bonds and forming significant holes on GO sheets. Our results showed that C-C bonds in a single graphene oxide sheet can be broken through a simple mechanism involving the dissociation of two chemically attached ClO molecules. The formation of carbonyl groups and holes on the GO surface was also observed. This study provides important insights into the degradation of carbon nanotubes and the stability of GO during the myeloperoxidase (MPO) catalytic cycle.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2024)

Article Chemistry, Physical

Composition dependence of X-ray stability and degradation mechanisms at lead halide perovskite single crystal surfaces

Alberto Garcia-Fernandez, Birgit Kammlander, Stefania Riva, Hakan Rensmo, Ute B. Cappel

Summary: In this study, the X-ray stability of five different lead halide perovskite compositions (MAPbI3, MAPbCl3, MAPbBr3, FAPbBr3, CsPbBr3) was investigated using photoelectron spectroscopy. Different degradation mechanisms and resistance to X-ray were observed depending on the crystal composition. Overall, perovskite compositions based on the MA+ cation were found to be less stable than those based on FA+ or Cs+. Metallic lead formation was most easily observed in the chloride perovskite, followed by bromide, and very little in MAPbI3. Multiple degradation processes were identified for the bromide compositions, including ion migration, formation of volatile and solid products, as well as metallic lead. CsBr was formed as a solid degradation product on the surface of CsPbBr3.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2024)

Article Chemistry, Physical

Effect of porosity on rapid dynamic compaction of nickel nanopowder

Timofei Rostilov, Vadim Ziborov, Alexander Dolgoborodov, Mikhail Kuskov

Summary: The shock-loading behavior of nanomaterials is investigated in this study. It is found that shock compaction waves exhibit a distinct two-step structure, with the formation of faster precursor waves that travel ahead of the main compaction waves. The complexity of the shock Hugoniot curve of the tested nanomaterial is described, and the effect of initial porosity on the compressed states is demonstrated.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2024)

Article Chemistry, Physical

The effect of temperature and oxygen partial pressure on the concentration of iron and manganese ions in La1/3Sr2/3Fe1-xMnxO3-δ

Sergey S. Nikitin, Alexander D. Koryakov, Elizaveta A. Antipinskaya, Alexey A. Markov, Mikhail V. Patrakeev

Summary: The stability of La1/3Sr2/3Fe1-xMnxO3-delta, a perovskite-type oxide, under reducing conditions is dependent on the manganese content. Increasing the manganese content leads to a decrease in stability. The behavior of iron and manganese in the oxide shows distinct differences, which can be attributed to the difference in the enthalpy of oxidation reactions. Additionally, the change in the La/Sr ratio affects the concentration of iron and manganese ions.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2024)

Article Chemistry, Physical

Perovskenes: two-dimensional perovskite-type monolayer materials predicted by first-principles calculations

Mosayeb Naseri, Shirin Amirian, Mehrdad Faraji, Mohammad Abdur Rashid, Maicon Pierre Lourenco, Venkataraman Thangadurai, D. R. Salahub

Summary: Inspired by the successful transfer of freestanding ultrathin films of SrTiO3 and BiFeO3, this study assessed the structural stability and investigated the electronic, optical, and thermoelectric properties of a group of two-dimensional perovskite-type materials called perovskenes. The findings revealed that these materials are wide bandgap semiconductors with potential application in UV shielding. Moreover, they exhibit better electrical and thermal conductivity at high temperatures, enabling efficient power generation in thermoelectric devices.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2024)