Probing protein ensemble rigidity and hydrogen–deuterium exchange

USING RIGIDITY ANALYSIS TO PROBE MUTATION-INDUCED STRUCTURAL CHANGES IN PROTEINS

(2012) FILIP JAGODZINSKI et al.   Journal of Bioinformatics and Computational Biology

Quantitative Assessment of Protein Structural Models by Comparison of H/D Exchange MS Data with Exchange Behavior Accurately Predicted by DXCOREX

(2011) Tong Liu et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Nanomechanics of functional and pathological amyloid materials

(2011) Tuomas P. J. Knowles et al.   Nature Nanotechnology

KINARI-Web: a server for protein rigidity analysis

(2011) N. Fox et al.   NUCLEIC ACIDS RESEARCH

Generating stereochemically acceptable protein pathways

(2010) Daniel W. Farrell et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Simplified Computational Methods for the Analysis of Protein Flexibility

(2009) Igor Kuznetsov   CURRENT PROTEIN & PEPTIDE SCIENCE

On the relation between residue flexibility and local solvent accessibility in proteins

(2009) Hua Zhang et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Probing the Flexibility of Large Conformational Changes in Protein Structures through Local Perturbations

(2009) Bosco K. Ho et al.   PLoS Computational Biology

Analyzing the Flexibility of RNA Structures by Constraint Counting

(2008) Simone Fulle et al.   BIOPHYSICAL JOURNAL

Impact of residue accessible surface area on the prediction of protein secondary structures

(2008) Amir Momen-Roknabadi et al.   BMC BIOINFORMATICS

Exploiting the Link between Protein Rigidity and Thermostability for Data-Driven Protein Engineering

(2008) S. Radestock et al.   ENGINEERING IN LIFE SCIENCES

Allosteric regulation and catalysis emerge via a common route

(2008) Nina M Goodey et al.   Nature Chemical Biology