Paging through history: parchment as a reservoir of ancient DNA for next generation sequencing

Genetic Distinctiveness of the Herdwick Sheep Breed and Two Other Locally Adapted Hill Breeds of the UK

(2014) Dianna Bowles et al.   PLoS One

“So bigge as bigge may be”: tracking size and shape change in domestic livestock in London (AD 1220–1900)

(2013) Richard Thomas et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse

(2013) Ludovic Orlando et al.   NATURE

Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans

(2013) Maanasa Raghavan et al.   NATURE

Mitogenomes from Two Uncommon Haplogroups Mark Late Glacial/Postglacial Expansions from the Near East and Neolithic Dispersals within Europe

(2013) Anna Olivieri et al.   PLoS One

Improving ancient DNA read mapping against modern reference genomes

(2012) Mikkel Schubert et al.   BMC GENOMICS

Genomic Affinities of Two 7,000-Year-Old Iberian Hunter-Gatherers

(2012) Federico Sánchez-Quinto et al.   CURRENT BIOLOGY

Independent confirmation of a diagnostic sheep/goat peptide sequence through DNA analysis and further exploration of its taxonomic utility within the Bovidae

(2012) Michael G. Campana et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

Origins and Genetic Legacy of Neolithic Farmers and Hunter-Gatherers in Europe

(2012) P. Skoglund et al.   SCIENCE

Genome-Wide Analysis of the World's Sheep Breeds Reveals High Levels of Historic Mixture and Strong Recent Selection

(2012) James W. Kijas et al.   PLOS BIOLOGY

Current Status and Future Perspectives for Sequencing Livestock Genomes

(2012) Yongsheng Bai et al.   Journal of Animal Science and Biotechnology

Ancient human DNA

(2011) Karola Kirsanow et al.   ANNALS OF ANATOMY-ANATOMISCHER ANZEIGER

Setting the stage – Building and working in an ancient DNA laboratory

(2011) Michael Knapp et al.   ANNALS OF ANATOMY-ANATOMISCHER ANZEIGER

A novel and non-destructive approach for ZooMS analysis: ammonium bicarbonate buffer extraction

(2011) Nienke Laura van Doorn et al.   Archaeological and Anthropological Sciences

A Complete mtDNA Genome of an Early Modern Human from Kostenki, Russia

(2010) Johannes Krause et al.   CURRENT BIOLOGY

Haplogroup relationships between domestic and wild sheep resolved using a mitogenome panel

(2010) J R S Meadows et al.   HEREDITY

A flock of sheep, goats and cattle: ancient DNA analysis reveals complexities of historical parchment manufacture

(2010) Michael G. Campana et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

Genetic history of an archaic hominin group from Denisova Cave in Siberia

(2010) David Reich et al.   NATURE

A Complete Mitochondrial Genome Sequence from a Mesolithic Wild Aurochs (Bos primigenius)

(2010) Ceiridwen J. Edwards et al.   PLoS One

A Draft Sequence of the Neandertal Genome

(2010) R. E. Green et al.   SCIENCE

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Distinguishing between archaeological sheep and goat bones using a single collagen peptide

(2009) Mike Buckley et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

Identification of animal skin of historical parchments by polymerase chain reaction (PCR)-based methods

(2009) Domenico Pangallo et al.   JOURNAL OF ARCHAEOLOGICAL SCIENCE

SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building

(2009) M. Gouy et al.   MOLECULAR BIOLOGY AND EVOLUTION

Species identification by analysis of bone collagen using matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry

(2009) Michael Buckley et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Genome-Wide Survey of SNP Variation Uncovers the Genetic Structure of Cattle Breeds

(2009) et al.   SCIENCE

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Identification of genetic variants using bar-coded multiplexed sequencing

(2008) David W Craig et al.   NATURE METHODS