Multiple scales of selection influence the evolutionary emergence of novel pathogens

INFLUENCE OF VIRAL REPLICATION MECHANISMS ON WITHIN-HOST EVOLUTIONARY DYNAMICS

(2012) Claude Loverdo et al.   EVOLUTION

Linking Influenza Virus Tissue Tropism to Population-Level Reproductive Fitness

(2012) Leslie A. Reperant et al.   PLoS One

New insights into the evolutionary rate of HIV-1 at the within-host and epidemiological levels

(2012) K. A. Lythgoe et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Benefits and Risks of Influenza Research: Lessons Learned

(2012) A. S. Fauci et al.   SCIENCE

Airborne Transmission of Influenza A/H5N1 Virus Between Ferrets

(2012) S. Herfst et al.   SCIENCE

The Potential for Respiratory Droplet-Transmissible A/H5N1 Influenza Virus to Evolve in a Mammalian Host

(2012) C. A. Russell et al.   SCIENCE

Evolution of an Eurasian Avian-like Influenza Virus in Naïve and Vaccinated Pigs

(2012) Pablo R. Murcia et al.   PLoS Pathogens

Role of Multiple Hosts in the Cross-Species Transmission and Emergence of a Pandemic Parvovirus

(2011) A. B. Allison et al.   JOURNAL OF VIROLOGY

The Role of Evolutionary Intermediates in the Host Adaptation of Canine Parvovirus

(2011) K. M. Stucker et al.   JOURNAL OF VIROLOGY

Modeling the Dynamics of Viral Evolution Considering Competition Within Individual Hosts and at Population Level: The Effects of Treatment

(2010) Marcos Amaku et al.   BULLETIN OF MATHEMATICAL BIOLOGY

Fitness Epistasis and Constraints on Adaptation in a Human Immunodeficiency Virus Type 1 Protein Region

(2010) J. da Silva et al.   GENETICS

Unfinished Stories on Viral Quasispecies and Darwinian Views of Evolution

(2010) Antonio Más et al.   JOURNAL OF MOLECULAR BIOLOGY

Risk factors for the evolutionary emergence of pathogens

(2010) H. K. Alexander et al.   Journal of the Royal Society Interface

Intra- and Interhost Evolutionary Dynamics of Equine Influenza Virus

(2010) P. R. Murcia et al.   JOURNAL OF VIROLOGY

Intrahost Evolutionary Dynamics of Canine Influenza Virus in Naive and Partially Immune Dogs

(2010) K. Hoelzer et al.   JOURNAL OF VIROLOGY

Viral Mutation Rates

(2010) R. Sanjuan et al.   JOURNAL OF VIROLOGY

Hepatitis C Virus Transmission Bottlenecks Analyzed by Deep Sequencing

(2010) G. P. Wang et al.   JOURNAL OF VIROLOGY

Identifying genetic markers of adaptation for surveillance of viral host jumps

(2010) Kim M. Pepin et al.   NATURE REVIEWS MICROBIOLOGY

Invasion Dynamics in Spatially Heterogeneous Environments

(2009) Sebastian J. Schreiber et al.   AMERICAN NATURALIST

Stepwise acquisition of pyrimethamine resistance in the malaria parasite

(2009) E. R. Lozovsky et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolution and emergence of novel human infections

(2009) N. Arinaminpathy et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Quantifying the Impact of Immune Escape on Transmission Dynamics of Influenza

(2009) A. W. Park et al.   SCIENCE

Epidemic Dynamics at the Human-Animal Interface

(2009) J. O. Lloyd-Smith et al.   SCIENCE

Pathways of Cross-Species Transmission of Synthetically Reconstructed Zoonotic Severe Acute Respiratory Syndrome Coronavirus

(2008) T. Sheahan et al.   JOURNAL OF VIROLOGY

Cross-Species Virus Transmission and the Emergence of New Epidemic Diseases

(2008) C. R. Parrish et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Global trends in emerging infectious diseases

(2008) Kate E. Jones et al.   NATURE

Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection

(2008) B. F. Keele et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Linking within- and between-host dynamics in the evolutionary epidemiology of infectious diseases

(2008) N MIDEO et al.   TRENDS IN ECOLOGY & EVOLUTION

Viral evolution and escape during primary human immunodeficiency virus-1 infection: implications for vaccine design

(2008) James I Mullins et al.   Current Opinion in HIV and AIDS