4.2 Review

Genetic-based biomarkers and next-generation sequencing: the future of personalized care in colorectal cancer

Journal

PERSONALIZED MEDICINE
Volume 8, Issue 3, Pages 331-345

Publisher

FUTURE MEDICINE LTD
DOI: 10.2217/PME.11.16

Keywords

adenocarcinoma; antineoplastic agents; biological analysis; biomarkers; cetuximab; colorectal neoplasms; EGFR inhibition; etiology; genetics; genomics; humans; panitumumab; sequencing; targeted therapies; tumor markers

Funding

  1. NIH [5K08CA96879-6, DK56339, 2P01HG000205]
  2. Doris Duke Clinical Foundation
  3. Reddere Foundation
  4. Liu Bie Ju Cha and Family Fellowship in Cancer
  5. Wang Family Foundation
  6. Howard Hughes Medical Foundation
  7. Sigrid Juselius Foundation
  8. Academy of Finland

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The past 5 years have witnessed extraordinary advances in the field of DNA sequencing technology. What once took years to accomplish with Sanger sequencing can now be accomplished in a matter of days with next-generation sequencing (NGS) technology. This has allowed researchers to sequence individual genomes and match combinations of mutations with specific diseases. As cancer is inherently a disease of the genome, it is not surprising to see NGS technology already being applied to cancer research with promises of greater understanding of carcinogenesis. While the task of deciphering the cancer genomic code remains ongoing, we are already beginning to see the application of genetic-based testing in the area of colorectal cancer. In this article we will provide an overview of current colorectal cancer geneticbased biomarkers, namely mutations and other genetic alterations in cancer genome DNA, discuss recent advances in NGS technology and speculate on future directions for the application of NGS technology to colorectal cancer diagnosis and treatment.

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