Comprehensive red blood cell and platelet antigen prediction from whole genome sequencing: proof of principle

Lack of the nucleoside transporter ENT1 results in the Augustine-null blood type and ectopic mineralization

(2015) G. Daniels et al.   BLOOD

BOOGIE: Predicting Blood Groups from High Throughput Sequencing Data

(2015) Manuel Giollo et al.   PLoS One

Next-generation sequencing is a credible strategy for blood group genotyping

(2014) Yann Fichou et al.   BRITISH JOURNAL OF HAEMATOLOGY

HLA typing by next-generation sequencing - getting closer to reality

(2014) C. Gabriel et al.   TISSUE ANTIGENS

A new blood group antigen is defined by anti-CD59, detected in a CD59-deficient patient

(2014) Markus Anliker et al.   TRANSFUSION

Extended Blood Group Molecular Typing and Next-Generation Sequencing

(2014) Zhugong Liu et al.   TRANSFUSION MEDICINE REVIEWS

The MedSeq Project: a randomized trial of integrating whole genome sequencing into clinical medicine

(2014) Jason L Vassy et al.   Trials

High prevalence of red blood cell alloimmunization in sickle cell disease despite transfusion from Rh-matched minority donors

(2013) S. T. Chou et al.   BLOOD

Genotyping of human neutrophil antigens (HNA) from whole genome sequencing data

(2013) Hsueh-Ting Chu et al.   BMC Medical Genomics

Disruption ofSMIM1causes the Vel− blood type

(2013) Bryan A. Ballif et al.   EMBO Molecular Medicine

Homozygosity for a null allele of SMIM1 defines the Vel-negative blood group phenotype

(2013) Jill R Storry et al.   NATURE GENETICS

SMIM1 underlies the Vel blood group and influences red blood cell traits

(2013) Ana Cvejic et al.   NATURE GENETICS

International Society of Blood Transfusion Working Party on red cell immunogenetics and blood group terminology: Cancun report (2012)

(2013) J. R. Storry et al.   VOX SANGUINIS

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

Somatic rearrangements across cancer reveal classes of samples with distinct patterns of DNA breakage and rearrangement-induced hypermutability

(2012) Y. Drier et al.   GENOME RESEARCH

IPD—the Immuno Polymorphism Database

(2012) James Robinson et al.   NUCLEIC ACIDS RESEARCH

A public resource facilitating clinical use of genomes

(2012) Madeleine P. Ball et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High-throughput, high-fidelity HLA genotyping with deep sequencing

(2012) C. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Super high resolution for single molecule-sequence-based typing of classical HLA loci at the 8-digit level using next generation sequencers

(2012) T. Shiina et al.   TISSUE ANTIGENS

Determination of human platelet antigen typing by molecular methods: Importance in diagnosis and early treatment of neonatal alloimmune thrombocytopenia

(2011) Suzanne A. Arinsburg et al.   AMERICAN JOURNAL OF HEMATOLOGY

Next-generation sequencing for HLA typing of class I loci

(2011) Rachel L Erlich et al.   BMC GENOMICS

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

BGMUT: NCBI dbRBC database of allelic variations of genes encoding antigens of blood group systems

(2011) S. K. Patnaik et al.   NUCLEIC ACIDS RESEARCH

The role of molecular immunohematology in sickle cell disease

(2011) Stella T. Chou et al.   TRANSFUSION AND APHERESIS SCIENCE

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Identification of a novel A4GALT exon reveals the genetic basis of the P1/P2 histo-blood groups

(2010) B. Thuresson et al.   BLOOD

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Next-generation sequencing: the solution for high-resolution, unambiguous human leukocyte antigen typing

(2010) C. Lind et al.   HUMAN IMMUNOLOGY

Overcoming methodical limits of standard RHD genotyping by next-generation sequencing

(2010) S. Stabentheiner et al.   VOX SANGUINIS

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

IPD—the Immuno Polymorphism Database

(2009) James Robinson et al.   NUCLEIC ACIDS RESEARCH

High-resolution, high-throughput HLA genotyping by next-generation sequencing

(2009) G. Bentley et al.   TISSUE ANTIGENS

The Bloodgen Project of the European Union, 2003–2009

(2009) Neil D. Avent et al.   TRANSFUSION MEDICINE AND HEMOTHERAPY

Accurate whole human genome sequencing using reversible terminator chemistry

(2008) David R. Bentley et al.   NATURE

Blood group A1and A2revisited: an immunochemical analysis

(2008) L. Svensson et al.   VOX SANGUINIS