The relativity of biological function

An Evolutionary Classification of Genomic Function

(2015) Dan Graur et al.   Genome Biology and Evolution

Defining functional DNA elements in the human genome

(2014) M. Kellis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phylogenetic patterns of emergence of new genes support a model of frequent de novo evolution

(2013) Rafik Neme et al.   BMC GENOMICS

The ENCODE project: Missteps overshadowing a success

(2013) Sean R. Eddy   CURRENT BIOLOGY

On the Immortality of Television Sets: "Function" in the Human Genome According to the Evolution-Free Gospel of ENCODE

(2013) D. Graur et al.   Genome Biology and Evolution

Widespread purifying selection on RNA structure in mammals

(2013) Martin A. Smith et al.   NUCLEIC ACIDS RESEARCH

Is junk DNA bunk? A critique of ENCODE

(2013) W. F. Doolittle   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Birth and expression evolution of mammalian microRNA genes

(2012) J. Meunier et al.   GENOME RESEARCH

An integrated encyclopedia of DNA elements in the human genome

(2012)   NATURE

Airn Transcriptional Overlap, But Not Its lncRNA Products, Induces Imprinted Igf2r Silencing

(2012) P. A. Latos et al.   SCIENCE

What fraction of the human genome is functional?

(2011) C. P. Ponting et al.   GENOME RESEARCH

The challenges and scope of theoretical biology

(2011) David C. Krakauer et al.   JOURNAL OF THEORETICAL BIOLOGY

The evolutionary origin of orphan genes

(2011) Diethard Tautz et al.   NATURE REVIEWS GENETICS

Measurement and Meaning in Biology

(2011) David Houle et al.   QUARTERLY REVIEW OF BIOLOGY

Nature and nurture in protein folding and binding

(2010) Laura Itzhaki et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Measuring Transcription Factor–Binding Site Turnover: A Maximum Likelihood Approach Using Phylogenies

(2009) Wolfgang Otto et al.   Genome Biology and Evolution