Shrinkage estimation of the genomic relationship matrix can improve genomic estimated breeding values in the training set

Genomic BLUP Decoded: A Look into the Black Box of Genomic Prediction

(2013) D. Habier et al.   GENETICS

Optimizing the allocation of resources for genomic selection in one breeding cycle

(2013) Christian Riedelsheimer et al.   THEORETICAL AND APPLIED GENETICS

Comparison of whole-genome prediction models for traits with contrasting genetic architecture in a diversity panel of maize inbred lines

(2012) Christian Riedelsheimer et al.   BMC GENOMICS

Whole-Genome Regression and Prediction Methods Applied to Plant and Animal Breeding

(2012) G. de los Campos et al.   GENETICS

Shrinkage Estimation of the Realized Relationship Matrix

(2012) Jeffrey B. Endelman et al.   G3-Genes Genomes Genetics

Variation in actual relationship as a consequence of Mendelian sampling and linkage

(2011) W.G. HILL et al.   Genetics Research

Using the genomic relationship matrix to predict the accuracy of genomic selection

(2011) M.E. Goddard et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Ridge Regression and Other Kernels for Genomic Selection with R Package rrBLUP

(2011) Jeffrey B. Endelman   Plant Genome

Genome-wide association and genomic selection in animal breedingThis article is one of a selection of papers from the conference “Exploiting Genome-wide Association in Oilseed Brassicas: a model for genetic improvement of major OECD crops for sustainable farming”.

(2010) Ben Hayes et al.   GENOME

Common SNPs explain a large proportion of the heritability for human height

(2010) Jian Yang et al.   NATURE GENETICS

Reconciling the analysis of IBD and IBS in complex trait studies

(2010) Joseph E. Powell et al.   NATURE REVIEWS GENETICS

Estimating Effects and Making Predictions from Genome-Wide Marker Data

(2010) Michael E. Goddard et al.   STATISTICAL SCIENCE

Population Structure and Cryptic Relatedness in Genetic Association Studies

(2010) William Astle et al.   STATISTICAL SCIENCE

Invited review: Genomic selection in dairy cattle: Progress and challenges

(2009) B.J. Hayes et al.   JOURNAL OF DAIRY SCIENCE

Understanding and using quantitative genetic variation

(2009) W. G. Hill   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Efficient Control of Population Structure in Model Organism Association Mapping

(2008) H. M. Kang et al.   GENETICS

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE

Use of doubled haploids in maize breeding: implications for intellectual property protection and genetic diversity in hybrid crops

(2008) J. S. C. Smith et al.   MOLECULAR BREEDING

The impact of genetic relationship information on genome-assisted breeding values

(2007) D. Habier et al.   GENETICS