Transcriptional landscape and essential genes of Neisseria gonorrhoeae

Infernal 1.1: 100-fold faster RNA homology searches

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Transcription of a cis-acting, Noncoding, Small RNA Is Required for Pilin Antigenic Variation in Neisseria gonorrhoeae

(2013) Laty A. Cahoon et al.   PLoS Pathogens

Pilus Phase Variation Switches Gonococcal Adherence to Invasion by Caveolin-1-Dependent Host Cell Signaling

(2013) Michaela Faulstich et al.   PLoS Pathogens

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Rfam 11.0: 10 years of RNA families

(2012) Sarah W. Burge et al.   NUCLEIC ACIDS RESEARCH

Deep sequencing-based analysis of the anaerobic stimulon in Neisseria gonorrhoeae

(2011) Vincent M Isabella et al.   BMC GENOMICS

WebMGA: a customizable web server for fast metagenomic sequence analysis

(2011) Sitao Wu et al.   BMC GENOMICS

A novel Hfq-dependent sRNA that is under FNR control and is synthesized in oxygen limitation in Neisseria meningitidis

(2011) Laura Fantappiè et al.   MOLECULAR MICROBIOLOGY

The essential genome of a bacterium

(2011) B. Christen et al.   Molecular Systems Biology

Deep Sequencing Whole Transcriptome Exploration of the σE Regulon in Neisseria meningitidis

(2011) Robert Antonius Gerhardus Huis in 't Veld et al.   PLoS One

Virulence determinants involved in differential host niche adaptation of Neisseria meningitidis and Neisseria gonorrhoeae

(2010) Stephanie Schielke et al.   MEDICAL MICROBIOLOGY AND IMMUNOLOGY

The primary transcriptome of the major human pathogen Helicobacter pylori

(2010) Cynthia M. Sharma et al.   NATURE

The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets

(2009) J. W. Nicol et al.   BIOINFORMATICS

Comprehensive identification of essential Staphylococcus aureus genes using Transposon-Mediated Differential Hybridisation (TMDH)

(2009) Roy R Chaudhuri et al.   BMC GENOMICS

The effect of hfq on global gene expression and virulence in Neisseria gonorrhoeae

(2009) Manuela Dietrich et al.   FEBS Journal

Transcriptional and Functional Analysis of the Neisseria gonorrhoeae Fur Regulon

(2009) L. A. Jackson et al.   JOURNAL OF BACTERIOLOGY

Transcript analysis of nrrF, a Fur repressed sRNA of Neisseria gonorrhoeae

(2009) Thomas F. Ducey et al.   MICROBIAL PATHOGENESIS

Tracking insertion mutants within libraries by deep sequencing and a genome-wide screen for Haemophilus genes required in the lung

(2009) J. D. Gawronski et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Riboswitches that sense S-adenosylmethionine and S-adenosylhomocysteineThis paper is one of a selection of papers published in this Special Issue, entitled CSBMCB — Systems and Chemical Biology, and has undergone the Journal's usual peer review process.

(2008) Joy Xin Wang et al.   Biochemistry and Cell Biology

The Hfq-Dependent Small Noncoding RNA NrrF Directly Mediates Fur-Dependent Positive Regulation of Succinate Dehydrogenase in Neisseria meningitidis

(2008) M. M. E. Metruccio et al.   JOURNAL OF BACTERIOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS