GEM2Net: from gene expression modeling to -omics networks, a new CATdb module to investigate Arabidopsis thaliana genes involved in stress response
Published 2014 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
GEM2Net: from gene expression modeling to -omics networks, a new CATdb module to investigate Arabidopsis thaliana genes involved in stress response
Authors
Keywords
-
Journal
NUCLEIC ACIDS RESEARCH
Volume 43, Issue D1, Pages D1010-D1017
Publisher
Oxford University Press (OUP)
Online
2014-11-13
DOI
10.1093/nar/gku1155
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Functional analysis of Arabidopsis immune-related MAPKs uncovers a role for MPK3 as negative regulator of inducible defences
- (2014) Nicolas Frei dit Frey et al. GENOME BIOLOGY
- GeneMANIA Prediction Server 2013 Update
- (2013) Khalid Zuberi et al. NUCLEIC ACIDS RESEARCH
- STIFDB2: An Updated Version of Plant Stress-Responsive TranscrIption Factor DataBase with Additional Stress Signals, Stress-Responsive Transcription Factor Binding Sites and Stress-Responsive Genes in Arabidopsis and Rice
- (2013) Mahantesha Naika et al. PLANT AND CELL PHYSIOLOGY
- Genes and Co-Expression Modules Common to Drought and Bacterial Stress Responses in Arabidopsis and Rice
- (2013) Rafi Shaik et al. PLoS One
- Systematic Identification of Functional Plant Modules through the Integration of Complementary Data Sources
- (2012) K. S. Heyndrickx et al. PLANT PHYSIOLOGY
- The Choice between MapMan and Gene Ontology for Automated Gene Function Prediction in Plant Science
- (2012) Sebastian Klie et al. Frontiers in Genetics
- Predicting gene ontology from a global meta-analysis of 1-color microarray experiments
- (2011) Mikhail G Dozmorov et al. BMC BIOINFORMATICS
- The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools
- (2011) Philippe Lamesch et al. NUCLEIC ACIDS RESEARCH
- ATTED-II Updates: Condition-Specific Gene Coexpression to Extend Coexpression Analyses and Applications to a Broad Range of Flowering Plants
- (2011) T. Obayashi et al. PLANT AND CELL PHYSIOLOGY
- Speeding Cis-Trans Regulation Discovery by Phylogenomic Analyses Coupled with Screenings of an Arrayed Library of Arabidopsis Transcription Factors
- (2011) Gabriel Castrillo et al. PLoS One
- Cytoscape Web: an interactive web-based network browser
- (2010) Christian T. Lopes et al. BIOINFORMATICS
- AHD2.0: an update version of Arabidopsis Hormone Database for plant systematic studies
- (2010) Z. Jiang et al. NUCLEIC ACIDS RESEARCH
- ‘Unknown’ proteins and ‘orphan’ enzymes: the missing half of the engineering parts list – and how to find it
- (2009) Andrew D. Hanson et al. BIOCHEMICAL JOURNAL
- A global meta-analysis of microarray expression data to predict unknown gene functions and estimate the literature-data divide
- (2009) Jonathan D. Wren BIOINFORMATICS
- Large-scale analysis of Arabidopsis transcription reveals a basal co-regulation network
- (2009) Osnat Atias et al. BMC Systems Biology
- Co-expression tools for plant biology: opportunities for hypothesis generation and caveats
- (2009) BJ��RN USADEL et al. PLANT CELL AND ENVIRONMENT
- Genome Annotation in Plants and Fungi: EuGene as a Model Platform
- (2008) Sylvain Foissac et al. Current Bioinformatics
- Implementation of GenePattern within the Stanford Microarray Database
- (2008) J. Hubble et al. NUCLEIC ACIDS RESEARCH
- Annotating Genes of Known and Unknown Function by Large-Scale Coexpression Analysis
- (2008) K. Horan et al. PLANT PHYSIOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now