The combination of transcriptomics and informatics identifies pathways targeted by miR-204 during neurogenesis and axon guidance

Non-coding RNAs in the development of sensory organs and related diseases

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miR-204 Targeting of Ankrd13A Controls Both Mesenchymal Neural Crest and Lens Cell Migration

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Pax6 Regulates Gene Expression in the Vertebrate Lens through miR-204

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Loss of miR-204 Expression Enhances Glioma Migration and Stem Cell-like Phenotype

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Identification of microRNA-regulated gene networks by expression analysis of target genes

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miRNA-Mediated Gene Silencing by Translational Repression Followed by mRNA Deadenylation and Decay

(2012) S. Djuranovic et al.   SCIENCE

Ribosome Profiling Shows That miR-430 Reduces Translation Before Causing mRNA Decay in Zebrafish

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A ceRNA Hypothesis: The Rosetta Stone of a Hidden RNA Language?

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A Slit/miR-218/Robo regulatory loop is required during heart tube formation in zebrafish

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Targeting Notch signalling by the conserved miR-8/200 microRNA family in development and cancer cells

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MicroRNA-9 Regulates Neurogenesis in Mouse Telencephalon by Targeting Multiple Transcription Factors

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miR-124 acts through CoREST to control onset of Sema3A sensitivity in navigating retinal growth cones

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Non-coding RNAs as regulators of embryogenesis

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Transcriptional mechanisms regulating skeletal muscle differentiation, growth and homeostasis

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SOAPsplice: Genome-Wide ab initio Detection of Splice Junctions from RNA-Seq Data

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BEDTools: a flexible suite of utilities for comparing genomic features

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MicroRNAs in embryonic stem cell function and fate

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Genome-wide Dissection of MicroRNA Functions and Cotargeting Networks Using Gene Set Signatures

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miR-204 is required for lens and retinal development via Meis2 targeting

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A Draft Sequence of the Neandertal Genome

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Ephrin-B1 regulates axon guidance by reverse signaling through a PDZ-dependent mechanism

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Generation of Medaka Fish Haploid Embryonic Stem Cells

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Messenger RNA regulation: to translate or to degrade

(2008) Ann-Bin Shyu et al.   EMBO JOURNAL

MicroRNA-9 Modulates Cajal-Retzius Cell Differentiation by Suppressing Foxg1 Expression in Mouse Medial Pallium

(2008) M. Shibata et al.   JOURNAL OF NEUROSCIENCE

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

MicroRNomics: a newly emerging approach for disease biology

(2008) Chunxiang Zhang   PHYSIOLOGICAL GENOMICS

A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome

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