Structural and biophysical characterization of Staphylococcus aureus SaMazF shows conservation of functional dynamics

Parallel dynamics and evolution: Protein conformational fluctuations and assembly reflect evolutionary changes in sequence and structure

(2013) Joseph A. Marsh et al.   BIOESSAYS

Molecular Mechanism of Bacterial Persistence by HipA

(2013) Elsa Germain et al.   MOLECULAR CELL

Structural Basis of mRNA Recognition and Cleavage by Toxin MazF and Its Regulation by Antitoxin MazE in Bacillus subtilis

(2013) Dhirendra K. Simanshu et al.   MOLECULAR CELL

The Fic protein Doc uses an inverted substrate to phosphorylate and inactivate EF-Tu

(2013) Daniel Castro-Roa et al.   Nature Chemical Biology

Divergent evolution of protein conformational dynamics in dihydrofolate reductase

(2013) Gira Bhabha et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Mycobacterial toxin MazF-mt6 inhibits translation through cleavage of 23S rRNA at the ribosomal A site

(2013) J. M. Schifano et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Towards automated crystallographic structure refinement withphenix.refine

(2012) Pavel V. Afonine et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Characterization of a mazEF Toxin-Antitoxin Homologue from Staphylococcus equorum

(2012) C. F. Schuster et al.   JOURNAL OF BACTERIOLOGY

Alternative interactions define gyrase specificity in the CcdB family

(2012) Natalie De Jonge et al.   MOLECULAR MICROBIOLOGY

Regulation of Enteric vapBC Transcription: Induction by VapC Toxin Dimer-Breaking

(2012) Kristoffer S. Winther et al.   NUCLEIC ACIDS RESEARCH

Structure-based model of allostery predicts coupling between distant sites

(2012) P. Weinkam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Selective translation during stress in Escherichia coli

(2012) Isabella Moll et al.   TRENDS IN BIOCHEMICAL SCIENCES

Inhibition of specific gene expressions by protein-mediated mRNA interference

(2012) Yoshihiro Yamaguchi et al.   Nature Communications

Macromolecular complexes in crystals and solutions

(2011) Evgeny Krissinel   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Crystallization of theStaphylococcus aureusMazF mRNA interferase

(2011) Valentina Zorzini et al.   Acta Crystallographica Section F-Structural Biology and Crystallization Communications

Toxin-Antitoxin Systems in Bacteria and Archaea

(2011) Yoshihiro Yamaguchi et al.   Annual Review of Genetics

Toxin-Antitoxin Systems Influence Biofilm and Persister Cell Formation and the General Stress Response

(2011) Xiaoxue Wang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

1H, 13C, and 15N backbone and side-chain chemical shift assignment of the staphylococcal MazF mRNA interferase

(2011) Valentina Zorzini et al.   Biomolecular NMR Assignments

Selective Translation of Leaderless mRNAs by Specialized Ribosomes Generated by MazF in Escherichia coli

(2011) Oliver Vesper et al.   CELL

Toxins-antitoxins: diversity, evolution and function

(2011) Finbarr Hayes et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

Bacillus subtilisMazF-bs (EndoA) is a UACAU-specific mRNA interferase

(2011) Jung-Ho Park et al.   FEBS LETTERS

Diversity of bacterial type II toxin–antitoxin systems: a comprehensive search and functional analysis of novel families

(2011) Raphaël Leplae et al.   NUCLEIC ACIDS RESEARCH

Features and development ofCoot

(2010) P. Emsley et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Allostery and Intrinsic Disorder Mediate Transcription Regulation by Conditional Cooperativity

(2010) Abel Garcia-Pino et al.   CELL

Vibrio choleraeParE2 Poisons DNA Gyrase via a Mechanism Distinct from Other Gyrase Inhibitors

(2010) Jie Yuan et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids

(2010) H. Ashkenazy et al.   NUCLEIC ACIDS RESEARCH

Role ofvapBCtoxin–antitoxin loci in the thermal stress response ofSulfolobus solfataricus

(2009) Charlotte R. Cooper et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

The Structural Basis for mRNA Recognition and Cleavage by the Ribosome-Dependent Endonuclease RelE

(2009) Cajetan Neubauer et al.   CELL

Structure and flexibility within proteins as identified through small angle X-ray scattering

(2009) M. Pelikan et al.   GENERAL PHYSIOLOGY AND BIOPHYSICS

Staphylococcus aureus MazF Specifically Cleaves a Pentad Sequence, UACAU, Which Is Unusually Abundant in the mRNA for Pathogenic Adhesive Factor SraP

(2009) L. Zhu et al.   JOURNAL OF BACTERIOLOGY

Regulation of the mazEF Toxin-Antitoxin Module in Staphylococcus aureus and Its Impact on sigB Expression

(2009) N. P. Donegan et al.   JOURNAL OF BACTERIOLOGY

Overexpression of MazFSa in Staphylococcus aureus Induces Bacteriostasis by Selectively Targeting mRNAs for Cleavage

(2009) Z. Fu et al.   JOURNAL OF BACTERIOLOGY

Structural and Thermodynamic Characterization ofVibrio fischeriCcdB

(2009) Natalie De Jonge et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts

(2009) Yang Shen et al.   JOURNAL OF BIOMOLECULAR NMR

Rejuvenation of CcdB-Poisoned Gyrase by an Intrinsically Disordered Protein Domain

(2009) Natalie De Jonge et al.   MOLECULAR CELL

Three new RelE-homologous mRNA interferases ofEscherichia colidifferentially induced by environmental stresses

(2009) Mikkel Christensen-Dalsgaard et al.   MOLECULAR MICROBIOLOGY

Escherichia coli MazF Leads to the Simultaneous Selective Synthesis of Both “Death Proteins” and “Survival Proteins”

(2009) Shahar Amitai et al.   PLoS Genetics

Messenger RNA interferase RelE controlsrelBEtranscription by conditional cooperativity

(2008) Martin Overgaard et al.   MOLECULAR MICROBIOLOGY

Translation affects YoeB and MazF messenger RNA interferase activities by different mechanisms

(2008) M. Christensen-Dalsgaard et al.   NUCLEIC ACIDS RESEARCH

Consistent blind protein structure generation from NMR chemical shift data

(2008) Y. Shen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA