Structural basis for the recognition of diastereomeric 5′,8-cyclo-2′-deoxypurine lesions by the human nucleotide excision repair system

Radical Cascade Protocol for the Synthesis of (5'S)- and (5'R)-5',8-Cyclo-2'-deoxyguanosine Derivatives

(2013) Michael A. Terzidis et al.   AUSTRALIAN JOURNAL OF CHEMISTRY

Free Energy Profiles of Base Flipping in Intercalative Polycyclic Aromatic Hydrocarbon-Damaged DNA Duplexes: Energetic and Structural Relationships to Nucleotide Excision Repair Susceptibility

(2013) Yuqin Cai et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Induction of 8,5′-Cyclo-2′-deoxyadenosine and 8,5′-Cyclo-2′-deoxyguanosine in Isolated DNA by Fenton-Type Reagents

(2013) Candace R. Guerrero et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Adenine–DNA Adducts Derived from the Highly Tumorigenic Dibenzo[a,l]pyrene Are Resistant to Nucleotide Excision Repair while Guanine Adducts Are Not

(2013) Konstantin Kropachev et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Prokaryotic Nucleotide Excision Repair

(2013) C. Kisker et al.   Cold Spring Harbor Perspectives in Biology

Nucleotide Excision Repair in Eukaryotes

(2013) O. D. Scharer   Cold Spring Harbor Perspectives in Biology

Nucleotide Excision Repair Efficiencies of Bulky Carcinogen–DNA Adducts Are Governed by a Balance between Stabilizing and Destabilizing Interactions

(2012) Yuqin Cai et al.   BIOCHEMISTRY

Structure and Stability of Duplex DNA Containing (5′S)-5′,8-Cyclo-2′-deoxyadenosine: An Oxidatively Generated Lesion Repaired by NER

(2012) Tatiana Zaliznyak et al.   CHEMICAL RESEARCH IN TOXICOLOGY

The Efficiencies of Damage Recognition and Excision Correlate with Duplex Destabilization Induced by Acetylaminofluorene Adducts in Human Nucleotide Excision Repair

(2012) Jung-Eun Yeo et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Structures of (5′S)-8,5′-Cyclo-2′-deoxyguanosine Mismatched with dA or dT

(2012) Hai Huang et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Repair efficiency of (5′S)-8,5′-cyclo-2′-deoxyguanosine and (5′S)-8,5′-cyclo-2′-deoxyadenosine depends on the complementary base

(2012) Paritosh Pande et al.   DNA REPAIR

The Emerging Roles of ATP-Dependent Chromatin Remodeling Enzymes in Nucleotide Excision Repair

(2012) Wioletta Czaja et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

A quantitative assay for assessing the effects of DNA lesions on transcription

(2012) Changjun You et al.   Nature Chemical Biology

Nucleotide excision repair of 2-acetylaminofluorene- and 2-aminofluorene-(C8)-guanine adducts: molecular dynamics simulations elucidate how lesion structure and base sequence context impact repair efficiencies

(2012) Hong Mu et al.   NUCLEIC ACIDS RESEARCH

Unusual sequence effects on nucleotide excision repair of arylamine lesions: DNA bending/distortion as a primary recognition factor

(2012) Vipin Jain et al.   NUCLEIC ACIDS RESEARCH

Quantification of Oxidative DNA Lesions in Tissues of Long-Evans Cinnamon Rats by Capillary High-Performance Liquid Chromatography−Tandem Mass Spectrometry Coupled with Stable Isotope-Dilution Method

(2011) Jin Wang et al.   ANALYTICAL CHEMISTRY

(5′S)-8,5′-Cyclo-2′-deoxyguanosine Is a Strong Block to Replication, a Potent pol V-Dependent Mutagenic Lesion, and Is Inefficiently Repaired inEscherichia coli

(2011) Vijay P. Jasti et al.   BIOCHEMISTRY

Purine 5′,8-cyclonucleoside lesions: chemistry and biology

(2011) Chryssostomos Chatgilialoglu et al.   CHEMICAL SOCIETY REVIEWS

Probing for DNA damage with β-hairpins: Similarities in incision efficiencies of bulky DNA adducts by prokaryotic and human nucleotide excision repair systems in vitro

(2011) Yang Liu et al.   DNA REPAIR

Structure of (5′S)-8,5′-Cyclo-2′-deoxyguanosine in DNA

(2011) Hai Huang et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Resistance of bulky DNA lesions to nucleotide excision repair can result from extensive aromatic lesion–base stacking interactions

(2011) Dara A. Reeves et al.   NUCLEIC ACIDS RESEARCH

High-throughput analysis of the mutagenic and cytotoxic properties of DNA lesions by next-generation sequencing

(2011) Bifeng Yuan et al.   NUCLEIC ACIDS RESEARCH

Identification and quantification of (5′R)- and (5′S)-8,5′-cyclo-2′-deoxyadenosines in human urine as putative biomarkers of oxidatively induced damage to DNA

(2010) Pawel Jaruga et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Inefficient Nucleotide Excision Repair in Human Cell Extracts of theN-(Deoxyguanosin-8-yl)-6-aminochrysene and 5-(Deoxyguanosin-N2-yl)-6-aminochrysene Adducts Derived from 6-Nitrochrysene

(2010) Jacek Krzeminski et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Divergent effects of oxidatively induced modification to the C8 of 2′-deoxyadenosine on transcription factor binding: 8,5′(S)-cyclo-2′-deoxyadenosine inhibits the binding of multiple sequence specific transcription factors, while 8-oxo-2′-deoxyadenosine i

(2010) Jessy Abraham et al.   ENVIRONMENTAL AND MOLECULAR MUTAGENESIS

Oxidatively generated base damage to cellular DNA

(2010) Jean Cadet et al.   FREE RADICAL BIOLOGY AND MEDICINE

Reactive species and DNA damage in chronic inflammation: reconciling chemical mechanisms and biological fates

(2010) Pallavi Lonkar et al.   INTERNATIONAL JOURNAL OF CANCER

Radiation-induced formation of purine 5′,8-cyclonucleosides in isolated and cellular DNA: high stereospecificity and modulating effect of oxygen

(2010) Nourreddine Belmadoui et al.   ORGANIC & BIOMOLECULAR CHEMISTRY

The Sequence Dependence of Human Nucleotide Excision Repair Efficiencies of Benzo[a]pyrene-derived DNA Lesions: Insights into the Structural Factors that Favor Dual Incisions

(2009) Konstantin Kropachev et al.   JOURNAL OF MOLECULAR BIOLOGY

DNA Damage and Radical Reactions: Mechanistic Aspects, Formation in Cells and Repair Studies

(2008) Jean Cadet et al.   CHIMIA

8,5′-Cyclopurine-2′-deoxynucleosides in DNA: Mechanisms of formation, measurement, repair and biological effects

(2008) Pawel Jaruga et al.   DNA REPAIR

Accumulation of (5′S)-8,5′-cyclo-2′-deoxyadenosine in organs of Cockayne syndrome complementation group B gene knockout mice

(2008) Güldal Kirkali et al.   DNA REPAIR

Differential Nucleotide Excision Repair Susceptibility of Bulky DNA Adducts in Different Sequence Contexts: Hierarchies of Recognition Signals

(2008) Yuqin Cai et al.   JOURNAL OF MOLECULAR BIOLOGY

The Fate of C5′ Radicals of Purine Nucleosides under Oxidative Conditions

(2008) Fabien Boussicault et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Effect of (5′S)-5′,8-cyclo-2′-deoxyadenosine on the conformation of di and trinucleotides. A NMR and DFT study

(2008) Boleslaw T. Karwowski et al.   ORGANIC & BIOMOLECULAR CHEMISTRY

Oxidative DNA damage in polymorphonuclear leukocytes of patients with familial Mediterranean fever

(2007) Güldal Kirkali et al.   FREE RADICAL BIOLOGY AND MEDICINE