Road rules for traffic on DNA—systematic analysis of transcriptional roadblockingin vivo

Thermodynamic Modeling of Variations in the Rate of RNA Chain Elongation of E. coli rrn Operons

(2014) David Fange et al.   BIOPHYSICAL JOURNAL

Repurposing CRISPR as an RNA-Guided Platform for Sequence-Specific Control of Gene Expression

(2013) Lei S. Qi et al.   CELL

Programmable repression and activation of bacterial gene expression using an engineered CRISPR-Cas system

(2013) David Bikard et al.   NUCLEIC ACIDS RESEARCH

Quantitation of the DNA tethering effect in long-range DNA looping in vivo and in vitro using the Lac and   repressors

(2013) D. G. Priest et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic Determinants and Cellular Constraints in Noisy Gene Expression

(2013) A. Sanchez et al.   SCIENCE

E. coli Fis Protein Insulates the cbpA Gene from Uncontrolled Transcription

(2013) Kiran Chintakayala et al.   PLoS Genetics

RNA Polymerase Backtracking in Gene Regulation and Genome Instability

(2012) Evgeny Nudler   CELL

The conflict between DNA replication and transcription

(2012) Peter McGlynn et al.   MOLECULAR MICROBIOLOGY

The lac Repressor Displays Facilitated Diffusion in Living Cells

(2012) P. Hammar et al.   SCIENCE

RNA polymerase pushing

(2011) Eric A. Galburt et al.   BIOPHYSICAL CHEMISTRY

Dancing on DNA: Kinetic Aspects of Search Processes on DNA

(2011) Anahita Tafvizi et al.   CHEMPHYSCHEM

Roadblock Repression of Transcription by Bacillus subtilis CodY

(2011) Boris R. Belitsky et al.   JOURNAL OF MOLECULAR BIOLOGY

Pausing and Backtracking in Transcription Under Dense Traffic Conditions

(2011) Stefan Klumpp   JOURNAL OF STATISTICAL PHYSICS

Collisions between Replication and Transcription Complexes Cause Common Fragile Site Instability at the Longest Human Genes

(2011) Anne Helmrich et al.   MOLECULAR CELL

Nascent transcript sequencing visualizes transcription at nucleotide resolution

(2011) L. Stirling Churchman et al.   NATURE

Quantitative dissection of the simple repression input-output function

(2011) H. G. Garcia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Transcription Factor DksA Prevents Conflicts between DNA Replication and Transcription Machinery

(2010) Ashley K. Tehranchi et al.   CELL

Cooperation Between Translating Ribosomes and RNA Polymerase in Transcription Elongation

(2010) S. Proshkin et al.   SCIENCE

Regulator Trafficking on Bacterial Transcription Units In Vivo

(2009) Rachel A. Mooney et al.   MOLECULAR CELL

Effects of macromolecular crowding and DNA looping on gene regulation kinetics

(2009) Gene-Wei Li et al.   Nature Physics

Nucleosomal Fluctuations Govern the Transcription Dynamics of RNA Polymerase II

(2009) C. Hodges et al.   SCIENCE

Transcription Termination Factor Rho Prefers Catalytically Active Elongation Complexes for Releasing RNA

(2008) Dipak Dutta et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

DNA Sequences in gal Operon Override Transcription Elongation Blocks

(2008) Dale E.A. Lewis et al.   JOURNAL OF MOLECULAR BIOLOGY

Stochasticity and traffic jams in the transcription of ribosomal RNA: Intriguing role of termination and antitermination

(2008) S. Klumpp et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA