Adepth: new representation and its implications for atomic depths of macromolecules

ProCoCoA: A quantitative approach for analyzing protein core composition

(2013) Silvia Bottini et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY

Computational Reconstruction of Multidomain Proteins Using Atomic Force Microscopy Data

(2012) Minh-Hieu Trinh et al.   STRUCTURE

Tobacco mosaic virus as an AFM tip calibrator

(2011) Minh-Hieu Trinh et al.   JOURNAL OF MOLECULAR RECOGNITION

DEPTH: a web server to compute depth and predict small-molecule binding cavities in proteins

(2011) Kuan Pern Tan et al.   NUCLEIC ACIDS RESEARCH

Structure-Activity Relationships in Peptide-Antibody Complexes: Implications for Epitope Prediction and Development of Synthetic Peptide Vaccines

(2009) Shu-wen Chen et al.   CURRENT MEDICINAL CHEMISTRY

Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome

(2009) Rebecca M Voorhees et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Prodepth: Predict Residue Depth by Support Vector Regression Approach from Protein Sequences Only

(2009) Jiangning Song et al.   PLoS One

Crystal Structure of Human Factor VIII: Implications for the Formation of the Factor IXa-Factor VIIIa Complex

(2008) Jacky Chi Ki Ngo et al.   STRUCTURE

Blind estimation of general tip shape in AFM imaging

(2008) Fenglei Tian et al.   ULTRAMICROSCOPY

PocketDepth: A new depth based algorithm for identification of ligand binding sites in proteins

(2007) Yeturu Kalidas et al.   JOURNAL OF STRUCTURAL BIOLOGY