Elucidating the evolutionary conserved DNA-binding specificities of WRKY transcription factors by molecular dynamics and in vitro binding assays

The WRKY transcription factor family in Brachypodium distachyon

(2013) Prateek Tripathi et al.   BMC GENOMICS

A Comparative Method for Both Discrete and Continuous Characters Using the Threshold Model

(2012) Joseph Felsenstein   AMERICAN NATURALIST

DNA binding by the plant-specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors

(2012) Ditte H. Welner et al.   BIOCHEMICAL JOURNAL

Structural Basis for Sequence-specific DNA Recognition by anArabidopsisWRKY Transcription Factor

(2012) Kazuhiko Yamasaki et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

WRKY54 and WRKY70 co-operate as negative regulators of leaf senescence in Arabidopsis thaliana

(2012) Sébastien Besseau et al.   JOURNAL OF EXPERIMENTAL BOTANY

Genome-wide analysis of WRKY transcription factors in Solanum lycopersicum

(2012) Shengxiong Huang et al.   MOLECULAR GENETICS AND GENOMICS

The Armadillo Repeat GeneZAK IXIKPromotesArabidopsisEarly Embryo and Endosperm Development through a Distinctive Gametophytic Maternal Effect

(2012) Quy A. Ngo et al.   PLANT CELL

Genome-wide survey and characterization of the WRKY gene family in Populus trichocarpa

(2012) Hongsheng He et al.   PLANT CELL REPORTS

Structural and Functional Analysis of VQ Motif-Containing Proteins in Arabidopsis as Interacting Proteins of WRKY Transcription Factors

(2012) Y. Cheng et al.   PLANT PHYSIOLOGY

DNA-binding domains of plant-specific transcription factors: structure, function, and evolution

(2012) Kazuhiko Yamasaki et al.   TRENDS IN PLANT SCIENCE

A Gene Family Derived from Transposable Elements during Early Angiosperm Evolution Has Reproductive Fitness Benefits in Arabidopsis thaliana

(2012) Zoé Joly-Lopez et al.   PLoS Genetics

Prerequisites, performance and profits of transcriptional profiling the abiotic stress response

(2011) Joachim Kilian et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Genome-wide analysis of WRKY gene family in Cucumis sativus

(2011) Jian Ling et al.   BMC GENOMICS

WRKY gene family evolution in Arabidopsis thaliana

(2011) Qishan Wang et al.   GENETICA

Flipping Watson and Crick

(2011) Barry Honig et al.   NATURE

Arabidopsis Sigma Factor Binding Proteins Are Activators of the WRKY33 Transcription Factor in Plant Defense

(2011) Z. Lai et al.   PLANT CELL

Volatiles of two growth-inhibiting rhizobacteria commonly engage AtWRKY18 function

(2011) Katrin Wenke et al.   PLANT JOURNAL

The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants

(2011) J. A. Banks et al.   SCIENCE

Origins of Specificity in Protein-DNA Recognition

(2010) Remo Rohs et al.   Annual Review of Biochemistry

BALL - biochemical algorithms library 1.3

(2010) Andreas Hildebrandt et al.   BMC BIOINFORMATICS

Genome-Wide Phylogenetic Comparative Analysis of Plant Transcriptional Regulation: A Timeline of Loss, Gain, Expansion, and Correlation with Complexity

(2010) Daniel Lang et al.   Genome Biology and Evolution

A new bioinformatics analysis tools framework at EMBL-EBI

(2010) M. Goujon et al.   NUCLEIC ACIDS RESEARCH

Dali server: conservation mapping in 3D

(2010) Liisa Holm et al.   NUCLEIC ACIDS RESEARCH

Epigenetic programming via histone methylation at WRKY53 controls leaf senescence in Arabidopsis thaliana

(2010) Nicole Ay et al.   PLANT JOURNAL

DPI-ELISA: a fast and versatile method to specify the binding of plant transcription factors to DNA in vitro

(2010) Luise H. Brand et al.   Plant Methods

Expression analyses indicate the involvement of sunflower WRKY transcription factors in stress responses, and phylogenetic reconstructions reveal the existence of a novel clade in the Asteraceae

(2010) Jorge I. Giacomelli et al.   PLANT SCIENCE

WRKY transcription factors

(2010) Paul J. Rushton et al.   TRENDS IN PLANT SCIENCE

Comparative Analyses of Plant Transcription Factor Databases

(2009) Silvia Ramirez et al.   CURRENT GENOMICS

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

The Role of WRKY Transcription Factors in Plant Immunity

(2009) S. P. Pandey et al.   PLANT PHYSIOLOGY

Phylogenetic and comparative gene expression analysis of barley (Hordeum vulgare) WRKY transcription factor family reveals putatively retained functions between monocots and dicots

(2008) Elke Mangelsen et al.   BMC GENOMICS

A Comprehensive Transcriptional Profiling of the WRKY Gene Family in Rice Under Various Abiotic and Phytohormone Treatments

(2008) Rengasamy Ramamoorthy et al.   PLANT AND CELL PHYSIOLOGY

Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function

(2008) Ingo Ciolkowski et al.   PLANT MOLECULAR BIOLOGY

Tobacco Transcription Factors: Novel Insights into Transcriptional Regulation in the Solanaceae

(2008) P. J. Rushton et al.   PLANT PHYSIOLOGY

The Maternally Expressed WRKY Transcription Factor TTG2 Controls Lethality in Interploidy Crosses of Arabidopsis

(2008) Brian P Dilkes et al.   PLOS BIOLOGY