Global identification of conserved post-transcriptional regulatory programs in trypanosomatids

A compendium of RNA-binding motifs for decoding gene regulation

(2013) Debashish Ray et al.   NATURE

Systematic discovery of structural elements governing stability of mammalian messenger RNAs

(2012) Hani Goodarzi et al.   NATURE

An integrated encyclopedia of DNA elements in the human genome

(2012)   NATURE

Developmental Progression to Infectivity in Trypanosoma brucei Triggered by an RNA-Binding Protein

(2012) N. G. Kolev et al.   SCIENCE

Poly(A)-Specific Ribonuclease (PARN-1) Function in Stage-Specific mRNA Turnover in Trypanosoma brucei

(2011) Christopher J. Utter et al.   EUKARYOTIC CELL

Ubiquitination of mRNA cycling sequence binding protein fromLeishmania donovani(LdCSBP) modulates the RNA endonuclease activity of its Smr domain

(2011) Dipankar Bhandari et al.   FEBS LETTERS

The Cell Cycle Regulated Transcriptome of Trypanosoma brucei

(2011) Stuart K. Archer et al.   PLoS One

Digital gene expression analysis of two life cycle stages of the human-infective parasite, Trypanosoma brucei gambiense reveals differentially expressed clusters of co-regulated genes

(2010) Nicola J Veitch et al.   BMC GENOMICS

The RNA helicase DHH1 is central to the correct expression of many developmentally regulated mRNAs in trypanosomes

(2010) S. Kramer et al.   JOURNAL OF CELL SCIENCE

A domino effect in drug action: from metabolic assault towards parasite differentiation

(2010) Jurgen R. Haanstra et al.   MOLECULAR MICROBIOLOGY

Genome-wide measurement of RNA secondary structure in yeast

(2010) Michael Kertesz et al.   NATURE

Spliced Leader Trapping Reveals Widespread Alternative Splicing Patterns in the Highly Dynamic Transcriptome of Trypanosoma brucei

(2010) Daniel Nilsson et al.   PLoS Pathogens

The Killing of African Trypanosomes by Ethidium Bromide

(2010) Arnab Roy Chowdhury et al.   PLoS Pathogens

Genome-wide computational identification of functional RNA elements in Trypanosoma brucei

(2009) Yuan Mao et al.   BMC GENOMICS

Genome-wide expression profiling of in vivo-derived bloodstream parasite stages and dynamic analysis of mRNA alterations during synchronous differentiation in Trypanosoma brucei

(2009) Sarah Kabani et al.   BMC GENOMICS

Transcriptome analysis of differentiating trypanosomes reveals the existence of multiple post-transcriptional regulons

(2009) Rafael Queiroz et al.   BMC GENOMICS

Widespread variation in transcript abundance within and across developmental stages of Trypanosoma brucei

(2009) Bryan C Jensen et al.   BMC GENOMICS

Discovering structural cis-regulatory elements by modeling the behaviors of mRNAs

(2009) Barrett C Foat et al.   Molecular Systems Biology

The trypanosome transcriptome is remodelled during differentiation but displays limited responsiveness within life stages

(2008) V Lila Koumandou et al.   BMC GENOMICS

Computational prediction of RNA structural motifs involved in posttranscriptional regulatory processes

(2008) M. Rabani et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA–protein interactions and control of mRNA stability in neurons

(2007) Federico Bolognani et al.   JOURNAL OF NEUROSCIENCE RESEARCH