Structural, functional and evolutionary relationships between homing endonucleases and proteins from their host organisms

Type II restriction endonuclease R.Hpy188I belongs to the GIY-YIG nuclease superfamily, but exhibits an unusual active site

(2012) Katarzyna H Kaminska et al.   BMC STRUCTURAL BIOLOGY

Activity, specificity and structure of I-Bth0305I: a representative of a new homing endonuclease family

(2011) Gregory K. Taylor et al.   NUCLEIC ACIDS RESEARCH

Homing Endonucleases: From Microbial Genetic Invaders to Reagents for Targeted DNA Modification

(2011) Barry L. Stoddard   STRUCTURE

DNA recognition and transcriptional regulation by the WhiA sporulation factor

(2011) Brett K. Kaiser et al.   Scientific Reports

The interaction of four-way DNA junctions with resolving enzymes

(2010) David M.J. Lilley   BIOCHEMICAL SOCIETY TRANSACTIONS

Emergence and Evolution of Modern Molecular Functions Inferred from Phylogenomic Analysis of Ontological Data

(2010) K. M. Kim et al.   MOLECULAR BIOLOGY AND EVOLUTION

Bacteriophage resistance mechanisms

(2010) Simon J. Labrie et al.   NATURE REVIEWS MICROBIOLOGY

Hpy188I-DNA pre- and post-cleavage complexes--snapshots of the GIY-YIG nuclease mediated catalysis

(2010) M. Sokolowska et al.   NUCLEIC ACIDS RESEARCH

Identification of new homologs of PD-(D/E)XK nucleases by support vector machines trained on data derived from profile-profile alignments

(2010) M. Laganeckas et al.   NUCLEIC ACIDS RESEARCH

Folding, DNA Recognition, and Function of GIY-YIG Endonucleases: Crystal Structures of R.Eco29kI

(2010) Amanda Nga-Sze Mak et al.   STRUCTURE

Unusual Target Site Disruption by the Rare-Cutting HNH Restriction Endonuclease PacI

(2010) Betty W. Shen et al.   STRUCTURE

Mobile DNA elements in T4 and related phages

(2010) David R Edgell et al.   Virology Journal

MutL: conducting the cell's response to mismatched and misaligned DNA

(2009) Yaroslava Y. Polosina et al.   BIOESSAYS

The Escherichia coli Mismatch Repair Protein MutL Recruits the Vsr and MutH Endonucleases in Response to DNA Damage

(2009) Y. Y. Polosina et al.   JOURNAL OF BACTERIOLOGY

Fractured genes: a novel genomic arrangement involving new split inteins and a new homing endonuclease family

(2009) Bareket Dassa et al.   NUCLEIC ACIDS RESEARCH

Crystal structure of the ββα-Me type II restriction endonuclease Hpy99I with target DNA

(2009) Monika Sokolowska et al.   NUCLEIC ACIDS RESEARCH

The Structure of a Bacterial DUF199/WhiA Protein: Domestication of an Invasive Endonuclease

(2009) Brett K. Kaiser et al.   STRUCTURE

Structural and evolutionary classification of Type II restriction enzymes based on theoretical and experimental analyses

(2008) Jerzy Orlowski et al.   NUCLEIC ACIDS RESEARCH