The folding of the hepatitis C virus internal ribosome entry site depends on the 3′-end of the viral genome

The functional RNA domain 5BSL3.2 within the NS5B coding sequence influences hepatitis C virus IRES-mediated translation

(2011) Cristina Romero-López et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Simplified RNA secondary structure mapping by automation of SHAPE data analysis

(2011) Phillip S. Pang et al.   NUCLEIC ACIDS RESEARCH

Structural basis for the biological relevance of the invariant apical stem in IRES-mediated translation

(2011) Noemí Fernández et al.   NUCLEIC ACIDS RESEARCH

HCV IRES domain IIb affects the configuration of coding RNA in the 40S subunit's decoding groove

(2011) M. E. Filbin et al.   RNA

Crystal Structure of the HCV IRES Central Domain Reveals Strategy for Start-Codon Positioning

(2011) Katherine E. Berry et al.   STRUCTURE

Influence of the hepatitis C virus 3′-untranslated region on IRES-dependent and cap-dependent translation initiation

(2010) C. Bung et al.   FEBS LETTERS

Structural analysis provides insights into the modular organization of picornavirus IRES

(2010) Noemí Fernández et al.   VIROLOGY

Positioning of subdomain IIId and apical loop of domain II of the hepatitis C IRES on the human 40S ribosome

(2009) E. Babaylova et al.   NUCLEIC ACIDS RESEARCH

A long-range RNA-RNA interaction between the 5' and 3' ends of the HCV genome

(2009) C. Romero-Lopez et al.   RNA

Influence of nucleotide identity on ribose 2'-hydroxyl reactivity in RNA

(2009) K. A. Wilkinson et al.   RNA

Strong Correlation between SHAPE Chemistry and the Generalized NMR Order Parameter (S2) in RNA

(2008) Costin M. Gherghe et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Accurate SHAPE-directed RNA structure determination

(2008) K. E. Deigan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

ShapeFinder: A software system for high-throughput quantitative analysis of nucleic acid reactivity information resolved by capillary electrophoresis

(2008) S. M. Vasa et al.   RNA

Structure and function of HCV IRES domains

(2008) Peter J. Lukavsky   VIRUS RESEARCH

High-Throughput SHAPE Analysis Reveals Structures in HIV-1 Genomic RNA Strongly Conserved across Distinct Biological States

(2008) Kevin A Wilkinson et al.   PLOS BIOLOGY