Gene3D: a domain-based resource for comparative genomics, functional annotation and protein network analysis

The Gene3D Web Services: a platform for identifying, annotating and comparing structural domains in protein sequences

(2011) C. Yeats et al.   NUCLEIC ACIDS RESEARCH

Cytoscape Web: an interactive web-based network browser

(2010) Christian T. Lopes et al.   BIOINFORMATICS

DIMA 3.0: Domain Interaction Map

(2010) Q. Luo et al.   NUCLEIC ACIDS RESEARCH

Extending CATH: increasing coverage of the protein structure universe and linking structure with function

(2010) A. L. Cuff et al.   NUCLEIC ACIDS RESEARCH

DrugBank 3.0: a comprehensive resource for 'Omics' research on drugs

(2010) C. Knox et al.   NUCLEIC ACIDS RESEARCH

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

(2010) D. Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Comparative analysis and unification of domain–domain interaction networks

(2009) Patrik Björkholm et al.   BIOINFORMATICS

Kaposi sarcoma-associated herpesvirus (KSHV): Molecular biology and oncogenesis

(2009) Kwun Wah Wen et al.   CANCER LETTERS

Gene3D: merging structure and function for a Thousand genomes

(2009) Jonathan Lees et al.   NUCLEIC ACIDS RESEARCH

GeMMA: functional subfamily classification within superfamilies of predicted protein structural domains

(2009) David A. Lee et al.   NUCLEIC ACIDS RESEARCH

ELM: the status of the 2010 eukaryotic linear motif resource

(2009) Cathryn M. Gould et al.   NUCLEIC ACIDS RESEARCH

GenomeRNAi: a database for cell-based RNAi phenotypes. 2009 update

(2009) Moritz Gilsdorf et al.   NUCLEIC ACIDS RESEARCH

Ensembl Genomes: Extending Ensembl across the taxonomic space

(2009) P. J. Kersey et al.   NUCLEIC ACIDS RESEARCH

The IntAct molecular interaction database in 2010

(2009) B. Aranda et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

The CATH Hierarchy Revisited—Structural Divergence in Domain Superfamilies and the Continuity of Fold Space

(2009) Alison Cuff et al.   STRUCTURE

FLORA: A Novel Method to Predict Protein Function from Structure in Diverse Superfamilies

(2009) Oliver C. Redfern et al.   PLoS Computational Biology

SUPERFAMILY—sophisticated comparative genomics, data mining, visualization and phylogeny

(2008) Derek Wilson et al.   NUCLEIC ACIDS RESEARCH

Human Protein Reference Database--2009 update

(2008) T. S. Keshava Prasad et al.   NUCLEIC ACIDS RESEARCH

Database resources of the National Center for Biotechnology Information

(2008) E. W. Sayers et al.   NUCLEIC ACIDS RESEARCH

PIPs: human protein-protein interaction prediction database

(2008) M. D. McDowall et al.   NUCLEIC ACIDS RESEARCH

Reactome knowledgebase of human biological pathways and processes

(2008) L. Matthews et al.   NUCLEIC ACIDS RESEARCH

NCBI Reference Sequences: current status, policy and new initiatives

(2008) K. D. Pruitt et al.   NUCLEIC ACIDS RESEARCH

InterPro: the integrative protein signature database

(2008) S. Hunter et al.   NUCLEIC ACIDS RESEARCH