cn.FARMS: a latent variable model to detect copy number variations in microarray data with a low false discovery rate

Preprocessing and downstream analysis of microarray DNA copy number profiles

(2010) M. A. van de Wiel et al.   BRIEFINGS IN BIOINFORMATICS

Genome-wide association study of CNVs in 16,000 cases of eight common diseases and 3,000 shared controls

(2010)   NATURE

Comparative analyses of seven algorithms for copy number variant identification from single nucleotide polymorphism arrays

(2010) Andrew E. Dellinger et al.   NUCLEIC ACIDS RESEARCH

Filtering data from high-throughput experiments based on measurement reliability

(2010) W. Talloen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Independent filtering increases detection power for high-throughput experiments

(2010) R. Bourgon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A single-array preprocessing method for estimating full-resolution raw copy numbers from all Affymetrix genotyping arrays including GenomeWideSNP 5 & 6

(2009) Henrik Bengtsson et al.   BIOINFORMATICS

Origins and functional impact of copy number variation in the human genome

(2009) Donald F. Conrad et al.   NATURE

Hidden Markov models for the assessment of chromosomal alterations using high-throughput SNP arrays

(2008) Robert B. Scharpf et al.   Annals of Applied Statistics

A segmental maximum a posteriori approach to genome-wide copy number profiling

(2008) Robin Andersson et al.   BIOINFORMATICS

Estimation and assessment of raw copy numbers at the single locus level

(2008) H. Bengtsson et al.   BIOINFORMATICS

Genome-wide copy number alterations detection in fresh frozen and matched FFPE samples using SNP 6.0 arrays

(2008) Marianne Tuefferd et al.   GENES CHROMOSOMES & CANCER

Genotype, haplotype and copy-number variation in worldwide human populations

(2008) Mattias Jakobsson et al.   NATURE

Integrated detection and population-genetic analysis of SNPs and copy number variation

(2008) Steven A McCarroll et al.   NATURE GENETICS

Integrated genotype calling and association analysis of SNPs, common copy number polymorphisms and rare CNVs

(2008) Joshua M Korn et al.   NATURE GENETICS