FunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamilies

ArchSchema: a tool for interactive graphing of related Pfam domain architectures

(2010) A. U. Tamuri et al.   BIOINFORMATICS

CORA-Topological fingerprints for protein structural families

(2010) Christine Anne Orengo   PROTEIN SCIENCE

Biopython: freely available Python tools for computational molecular biology and bioinformatics

(2009) P. J. A. Cock et al.   BIOINFORMATICS

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

Missing in action: enzyme functional annotations in biological databases

(2009) Nicholas Furnham et al.   Nature Chemical Biology

Protein function prediction – the power of multiplicity

(2009) Robert Rentzsch et al.   TRENDS IN BIOTECHNOLOGY

Small Molecule Subgraph Detector (SMSD) toolkit

(2009) Syed Rahman et al.   Journal of Cheminformatics

Annotation Error in Public Databases: Misannotation of Molecular Function in Enzyme Superfamilies

(2009) Alexandra M. Schnoes et al.   PLoS Computational Biology

Recent developments in the MAFFT multiple sequence alignment program

(2008) K. Katoh et al.   BRIEFINGS IN BIOINFORMATICS

PDBsum new things

(2008) R. A. Laskowski   NUCLEIC ACIDS RESEARCH

The Universal Protein Resource (UniProt) 2009

(2008)   NUCLEIC ACIDS RESEARCH

GenBank

(2008) D. A. Benson et al.   NUCLEIC ACIDS RESEARCH