CIPRO 2.5: Ciona intestinalis protein database, a unique integrated repository of large-scale omics data, bioinformatic analyses and curated annotation, with user rating and reviewing functionality

H-InvDB in 2009: extended database and data mining resources for human genes and transcripts

(2009) Chisato Yamasaki et al.   NUCLEIC ACIDS RESEARCH

The Gene Ontology in 2010: extensions and refinements

(2009)   NUCLEIC ACIDS RESEARCH

PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium

(2009) Huaiyu Mi et al.   NUCLEIC ACIDS RESEARCH

Proteomic profiles of embryonic development in the ascidian Ciona intestinalis

(2008) Mamoru Nomura et al.   DEVELOPMENTAL BIOLOGY

The amphioxus genome and the evolution of the chordate karyotype

(2008) Nicholas H. Putnam et al.   NATURE

SUPERFAMILY—sophisticated comparative genomics, data mining, visualization and phylogeny

(2008) Derek Wilson et al.   NUCLEIC ACIDS RESEARCH

InterPro: the integrative protein signature database

(2008) S. Hunter et al.   NUCLEIC ACIDS RESEARCH

Molecular characterization of axonemal proteins and signaling molecules responsible for chemoattractant-induced sperm activation inCiona intestinalis

(2008) Akiko Hozumi et al.   CELL MOTILITY AND THE CYTOSKELETON

Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations

(2008) Yutaka Satou et al.   GENOME BIOLOGY