3did: identification and classification of domain-based interactions of known three-dimensional structure

The Structural Basis of Peptide-Protein Binding Strategies

(2010) Nir London et al.   STRUCTURE

Novel Peptide-Mediated Interactions Derived from High-Resolution 3-Dimensional Structures

(2010) Amelie Stein et al.   PLoS Computational Biology

ADAN: a database for prediction of protein-protein interaction of modular domains mediated by linear motifs

(2009) J. A. Encinar et al.   BIOINFORMATICS

Dynamic interactions of proteins in complex networks: a more structured view

(2009) Amelie Stein et al.   FEBS Journal

PepX: a structural database of non-redundant protein–peptide complexes

(2009) Peter Vanhee et al.   NUCLEIC ACIDS RESEARCH

ELM: the status of the 2010 eukaryotic linear motif resource

(2009) Cathryn M. Gould et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Analyzing Protein Interaction Networks Using Structural Information

(2008) Christina Kiel et al.   Annual Review of Biochemistry

SCOWLP classification: Structural comparison and analysis of protein binding regions

(2008) Joan Teyra et al.   BMC BIOINFORMATICS

3did Update: domain-domain and peptide-mediated interactions of known 3D structure

(2008) A. Stein et al.   NUCLEIC ACIDS RESEARCH

Contextual Specificity in Peptide-Mediated Protein Interactions

(2008) Amelie Stein et al.   PLoS One