Computational identification of tissue-specific alternative splicing elements in mouse genes from RNA-Seq
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Title
Computational identification of tissue-specific alternative splicing elements in mouse genes from RNA-Seq
Authors
Keywords
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Journal
NUCLEIC ACIDS RESEARCH
Volume 38, Issue 22, Pages 7895-7907
Publisher
Oxford University Press (OUP)
Online
2010-08-05
DOI
10.1093/nar/gkq679
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Related references
Note: Only part of the references are listed.- Statistical inferences for isoform expression in RNA-Seq
- (2009) Hui Jiang et al. BIOINFORMATICS
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- Decrypting the genome's alternative messages
- (2009) Britta Hartmann et al. CURRENT OPINION IN CELL BIOLOGY
- HRP-2, theCaenorhabditis elegansHomolog of Mammalian Heterogeneous Nuclear Ribonucleoproteins Q and R, Is an Alternative Splicing Factor That Binds to UCUAUC Splicing Regulatory Elements
- (2009) Jennifer L. Kabat et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Prediction of alternatively skipped exons and splicing enhancers from exon junction arrays
- (2008) Katerina Kechris et al. BMC GENOMICS
- Alternative isoform regulation in human tissue transcriptomes
- (2008) Eric T. Wang et al. NATURE
- Expression of 24,426 human alternative splicing events and predicted cis regulation in 48 tissues and cell lines
- (2008) John C Castle et al. NATURE GENETICS
- Mapping and quantifying mammalian transcriptomes by RNA-Seq
- (2008) Ali Mortazavi et al. NATURE METHODS
- RNA-Seq: a revolutionary tool for transcriptomics
- (2008) Zhong Wang et al. NATURE REVIEWS GENETICS
- Strategies for Identifying RNA Splicing Regulatory Motifs and Predicting Alternative Splicing Events
- (2008) Dirk Holste et al. PLoS Computational Biology
- Splicing regulation: From a parts list of regulatory elements to an integrated splicing code
- (2008) Z. Wang et al. RNA
- Alternative splicing: current perspectives
- (2007) Eddo Kim et al. BIOESSAYS
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