VisANT 3.5: multi-scale network visualization, analysis and inference based on the gene ontology

Testing for treatment effects on gene ontology

(2008) Taewon Lee et al.   BMC BIOINFORMATICS

Interactive analysis of systems biology molecular expression data

(2008) Mingwu Zhang et al.   BMC Systems Biology

VisANT: an integrative framework for networks in systems biology

(2008) Z. Hu et al.   BRIEFINGS IN BIOINFORMATICS

Use and misuse of the gene ontology annotations

(2008) Seung Yon Rhee et al.   NATURE REVIEWS GENETICS

GraphWeb: mining heterogeneous biological networks for gene modules with functional significance

(2008) J. Reimand et al.   NUCLEIC ACIDS RESEARCH

ProfCom: a web tool for profiling the complex functionality of gene groups identified from high-throughput data

(2008) Alexey V. Antonov et al.   NUCLEIC ACIDS RESEARCH

PaLS: filtering common literature, biological terms and pathway information

(2008) A. Alibes et al.   NUCLEIC ACIDS RESEARCH

NeAT: a toolbox for the analysis of biological networks, clusters, classes and pathways

(2008) S. Brohee et al.   NUCLEIC ACIDS RESEARCH

A critical assessment of Mus musculus gene function prediction using integrated genomic evidence

(2008) Lourdes Peña-Castillo et al.   GENOME BIOLOGY