In silico selection of RNA aptamers

DOVIS: an implementation for high-throughput virtual screening using AutoDock

(2008) Shuxing Zhang et al.   BMC BIOINFORMATICS

DOVIS 2.0: an efficient and easy to use parallel virtual screening tool based on AutoDock 4.0

(2008) Xiaohui Jiang et al.   Chemistry Central Journal

On the structural repertoire of pools of short, random RNA sequences

(2008) Michael Stich et al.   JOURNAL OF THEORETICAL BIOLOGY

Array-based evolution of DNA aptamers allows modelling of an explicit sequence-fitness landscape

(2008) Christopher G. Knight et al.   NUCLEIC ACIDS RESEARCH

The Vienna RNA Websuite

(2008) A. R. Gruber et al.   NUCLEIC ACIDS RESEARCH

Massively Parallel Interrogation of Aptamer Sequence, Structure and Function

(2008) Nicholas O. Fischer et al.   PLoS One

Ab initio RNA folding by discrete molecular dynamics: From structure prediction to folding mechanisms

(2008) F. Ding et al.   RNA