Mining regulatory 5′UTRs from cDNA deep sequencing datasets

Regulatory RNAs in Bacteria

(2009) Lauren S. Waters et al.   CELL

Microbial thermosensors

(2009) Birgit Klinkert et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Expanding roles for metabolite-sensing regulatory RNAs

(2009) Michael D Dambach et al.   CURRENT OPINION IN MICROBIOLOGY

Structure and Complexity of a Bacterial Transcriptome

(2009) K. D. Passalacqua et al.   JOURNAL OF BACTERIOLOGY

Biochemical Features and Functional Implications of the RNA-Based T-Box Regulatory Mechanism

(2009) A. Gutierrez-Preciado et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Experimental discovery of sRNAs in Vibrio cholerae by direct cloning, 5S/tRNA depletion and parallel sequencing

(2009) Jane M. Liu et al.   NUCLEIC ACIDS RESEARCH

Mapping the Burkholderia cenocepacia niche response via high-throughput sequencing

(2009) D. R. Yoder-Himes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Strand-Specific RNA–Seq Analysis of the Transcriptome of the Typhoid Bacillus Salmonella Typhi

(2009) Timothy T. Perkins et al.   PLoS Genetics

Evolution of bacterial trp operons and their regulation

(2008) Enrique Merino et al.   CURRENT OPINION IN MICROBIOLOGY

A widespread riboswitch candidate that controls bacterial genes involved in molybdenum cofactor and tungsten cofactor metabolism

(2008) Elizabeth E. Regulski et al.   MOLECULAR MICROBIOLOGY

EcoCyc: A comprehensive view of Escherichia coli biology

(2008) I. M. Keseler et al.   NUCLEIC ACIDS RESEARCH

Rfam: updates to the RNA families database

(2008) P. P. Gardner et al.   NUCLEIC ACIDS RESEARCH

High-Throughput, Kingdom-Wide Prediction and Annotation of Bacterial Non-Coding RNAs

(2008) Jonathan Livny et al.   PLoS One

Riboswitches in Eubacteria Sense the Second Messenger Cyclic Di-GMP

(2008) N. Sudarsan et al.   SCIENCE