f POP: footprinting functional pockets of proteins by comparative spatial patterns

Predicting Protein Function and Binding Profile via Matching of Local Evolutionary and Geometric Surface Patterns

(2009) Yan Yuan Tseng et al.   JOURNAL OF MOLECULAR BIOLOGY

SplitPocket: identification of protein functional surfaces and characterization of their spatial patterns

(2009) Y. Y. Tseng et al.   NUCLEIC ACIDS RESEARCH

Identification of protein functional surfaces by the concept of a split pocket

(2009) Yan Yuan Tseng et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures

(2008) Gabriele Ausiello et al.   BMC BIOINFORMATICS

The ConSurf-DB: pre-calculated evolutionary conservation profiles of protein structures

(2008) Ofir Goldenberg et al.   NUCLEIC ACIDS RESEARCH

Fast protein tertiary structure retrieval based on global surface shape similarity

(2008) Lee Sael et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS