Non-coding RNA annotation of the genome of Trichoplax adhaerens

Searching for evolutionary distant RNA homologs within genomic sequences using partition function posterior probabilities

(2008) Usman Roshan et al.   BMC BIOINFORMATICS

RNAalifold: improved consensus structure prediction for RNA alignments

(2008) Stephan H Bernhart et al.   BMC BIOINFORMATICS

In silico identification of conserved microRNAs in large number of diverse plant species

(2008) Ramanjulu Sunkar et al.   BMC PLANT BIOLOGY

Animal Evolution: Trichoplax, Trees, and Taxonomic Turmoil

(2008) David J. Miller et al.   CURRENT BIOLOGY

NcDNAlign: Plausible multiple alignments of non-protein-coding genomic sequences

(2008) Dominic Rose et al.   GENOMICS

Invertebrate 7SK snRNAs

(2008) Andreas R. Gruber et al.   JOURNAL OF MOLECULAR EVOLUTION

Arthropod 7SK RNA

(2008) A. R. Gruber et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Trichoplax genome and the nature of placozoans

(2008) Mansi Srivastava et al.   NATURE

Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals

(2008) Andrew Grimson et al.   NATURE

Broad phylogenomic sampling improves resolution of the animal tree of life

(2008) Casey W. Dunn et al.   NATURE

Genome-wide discovery and verification of novel structured RNAs in Plasmodium falciparum

(2007) T. Mourier et al.   GENOME RESEARCH