Temporal patterns of orchid mycorrhizal fungi in meadows and forests as revealed by 454 pyrosequencing

Photosynthesis in perennial mixotrophicEpipactisspp. (Orchidaceae) contributes more to shoot and fruit biomass than to hypogeous survival

(2014) Cédric Gonneau et al.   JOURNAL OF ECOLOGY

Global biogeography of the ectomycorrhizal /sebacina lineage (Fungi, Sebacinales) as revealed from comparative phylogenetic analyses

(2014) Leho Tedersoo et al.   MOLECULAR ECOLOGY

Impact of primer choice on characterization of orchid mycorrhizal communities using 454 pyrosequencing

(2014) Michael Waud et al.   Molecular Ecology Resources

Morphology and molecules: the Sebacinales, a case study

(2014) Franz Oberwinkler et al.   MYCOLOGICAL PROGRESS

Understanding evolution and the complexity of species interactions using orchids as a model system

(2014) Judith L. Bronstein et al.   NEW PHYTOLOGIST

The latest news from biological interactions in orchids: in love, head to toe

(2014) Marc-André Selosse   NEW PHYTOLOGIST

Carbon and nitrogen gain during the growth of orchid seedlings in nature

(2014) Marcus Stöckel et al.   NEW PHYTOLOGIST

Global diversity and geography of soil fungi

(2014) L. Tedersoo et al.   SCIENCE

Why do mixotrophic plants stay green? A comparison between green and achlorophyllous orchid individuals in situ

(2013) M. Roy et al.   ECOLOGICAL MONOGRAPHS

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Enigmatic Sebacinales

(2013) Franz Oberwinkler et al.   MYCOLOGICAL PROGRESS

Taxonomic re-evaluation of the Ceratobasidium-Rhizoctonia complex and Rhizoctonia butinii, a new species attacking spruce

(2013) Franz Oberwinkler et al.   MYCOLOGICAL PROGRESS

Diversity of root-associated fungi of mature Habenaria radiata and Epipactis thunbergii colonizing manmade wetlands in Hiroshima Prefecture, Japan

(2013) Charles C. Cowden et al.   MYCOSCIENCE

Fungal community analysis by high-throughput sequencing of amplified markers - a user's guide

(2013) Björn D. Lindahl et al.   NEW PHYTOLOGIST

Coexisting orchid species have distinct mycorrhizal communities and display strong spatial segregation

(2013) Hans Jacquemyn et al.   NEW PHYTOLOGIST

Seasonal dynamics of fungal communities in a temperate oak forest soil

(2013) Jana Voříšková et al.   NEW PHYTOLOGIST

What constrains the distribution of orchid populations?

(2013) Melissa K. McCormick et al.   NEW PHYTOLOGIST

Lineages of ectomycorrhizal fungi revisited: Foraging strategies and novel lineages revealed by sequences from belowground

(2013) Leho Tedersoo et al.   Fungal Biology Reviews

A diverse fungal community associated with Pseudorchis albida (Orchidaceae) roots

(2012) Petr Kohout et al.   Fungal Ecology

The role of epiphytism in architecture and evolutionary constraint within mycorrhizal networks of tropical orchids

(2012) FLORENT MARTOS et al.   MOLECULAR ECOLOGY

Fast, accurate error-correction of amplicon pyrosequences using Acacia

(2012) Lauren Bragg et al.   NATURE METHODS

Photosynthetic Mediterranean meadow orchids feature partial mycoheterotrophy and specific mycorrhizal associations

(2011) Mariangela Girlanda et al.   AMERICAN JOURNAL OF BOTANY

The Effects of Above- and Belowground Mutualisms on Orchid Speciation and Coexistence

(2011) Richard J. Waterman et al.   AMERICAN NATURALIST

Clustering 16S rRNA for OTU prediction: a method of unsupervised Bayesian clustering

(2011) Xiaolin Hao et al.   BIOINFORMATICS

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Nonrandom spatial structuring of orchids in a hybrid zone of three Orchis species

(2011) Hans Jacquemyn et al.   NEW PHYTOLOGIST

Analysis of network architecture reveals phylogenetic constraints on mycorrhizal specificity in the genus Orchis (Orchidaceae)

(2011) Hans Jacquemyn et al.   NEW PHYTOLOGIST

Reciprocal Rewards Stabilize Cooperation in the Mycorrhizal Symbiosis

(2011) E. T. Kiers et al.   SCIENCE

Using null models to disentangle variation in community dissimilarity from variation in α-diversity

(2011) Jonathan M. Chase et al.   Ecosphere

C and N stable isotope signatures reveal constraints to nutritional modes in orchids from the Mediterranean and Macaronesia

(2010) Heiko T. Liebel et al.   AMERICAN JOURNAL OF BOTANY

Mycorrhizal associations and reproductive isolation in three closely related Orchis species

(2010) Hans Jacquemyn et al.   ANNALS OF BOTANY

ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases

(2010) Eva Bellemain et al.   BMC MICROBIOLOGY

Low specificity and nested subset structure characterize mycorrhizal associations in five closely related species of the genus Orchis

(2010) HANS JACQUEMYN et al.   MOLECULAR ECOLOGY

Massively parallel 454-sequencing of fungal communities inQuercusspp. ectomycorrhizas indicates seasonal dynamics in urban and rural sites

(2010) ARI JUMPPONEN et al.   MOLECULAR ECOLOGY

454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

(2010) Leho Tedersoo et al.   NEW PHYTOLOGIST

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

Functional and genetic diversity of mycorrhizal fungi from single plants of Caladenia formosa (Orchidaceae)

(2009) Tien T. Huynh et al.   ANNALS OF BOTANY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

From extensive clone libraries to comprehensive DNA arrays for the efficient and simultaneous detection and identification of orchid mycorrhizal fungi

(2009) Bart Lievens et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Characterization of mycorrhizal fungi isolated from the threatened Cypripedium macranthos in a northern island of Japan: two phylogenetically distinct fungi associated with the orchid

(2009) Hanako Shimura et al.   MYCORRHIZA

Atractiellomycetes belonging to the 'rust' lineage (Pucciniomycotina) form mycorrhizae with terrestrial and epiphytic neotropical orchids

(2009) I. Kottke et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Mycorrhizal interactions of orchids colonizing Estonian mine tailings hills

(2008) Richard P. Shefferson et al.   AMERICAN JOURNAL OF BOTANY

Elucidating the nutritional dynamics of fungi using stable isotopes

(2008) Jordan R. Mayor et al.   ECOLOGY LETTERS

Internal transcribed spacer primers and sequences for improved characterization of basidiomycetous orchid mycorrhizas

(2008) D. Lee Taylor et al.   NEW PHYTOLOGIST

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY