Green Targeting Predictor and Ambiguous Targeting Predictor 2: the pitfalls of plant protein targeting prediction and of transient protein expression in heterologous systems

Dual targeting of aminoacyl-tRNA synthetases to the mitochondrion and complex plastid in chlorarachniophytes

(2012) Y. Hirakawa et al.   JOURNAL OF CELL SCIENCE

Cyanophora paradoxa Genome Elucidates Origin of Photosynthesis in Algae and Plants

(2012) D. C. Price et al.   SCIENCE

Proteome analysis of chloroplasts from the moss Physcomitrella patens (Hedw.) B.S.G.

(2011) N. B. Polyakov et al.   BIOCHEMISTRY-MOSCOW

TimeTree2: species divergence times on the iPhone

(2011) S. Kumar et al.   BIOINFORMATICS

The Arabidopsis translocator protein (AtTSPO) is regulated at multiple levels in response to salt stress and perturbations in tetrapyrrole metabolism

(2011) Emilia Balsemão-Pires et al.   BMC PLANT BIOLOGY

A new system for fast and quantitative analysis of heterologous gene expression in plants

(2011) J. Thévenin et al.   NEW PHYTOLOGIST

One Protoplast Is Not the Other!

(2011) M. Faraco et al.   PLANT PHYSIOLOGY

An in silico analysis of the mitochondrial protein import apparatus of plants

(2010) Chris Carrie et al.   BMC PLANT BIOLOGY

Genome-Wide Phylogenetic Comparative Analysis of Plant Transcriptional Regulation: A Timeline of Loss, Gain, Expansion, and Correlation with Complexity

(2010) Daniel Lang et al.   Genome Biology and Evolution

YLoc—an interpretable web server for predicting subcellular localization

(2010) Sebastian Briesemeister et al.   NUCLEIC ACIDS RESEARCH

BRENDA, the enzyme information system in 2011

(2010) M. Scheer et al.   NUCLEIC ACIDS RESEARCH

Brittle Culm 12, a dual-targeting kinesin-4 protein, controls cell-cycle progression and wall properties in rice

(2010) Mu Zhang et al.   PLANT JOURNAL

Combining Machine Learning and Homology-Based Approaches to Accurately Predict Subcellular Localization in Arabidopsis

(2010) Rakesh Kaundal et al.   PLANT PHYSIOLOGY

Chloroplast RNA-binding proteins: Repair and regulation of chloroplast transcripts

(2010) Michael Tillich et al.   RNA Biology

MultiLoc2: integrating phylogeny and Gene Ontology terms improves subcellular protein localization prediction

(2009) Torsten Blum et al.   BMC BIOINFORMATICS

Protein import machineries in endosymbiotic organelles

(2009) M. Balsera et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Regulation of stem cell maintenance by the Polycomb protein FIE has been conserved during land plant evolution

(2009) A. Mosquna et al.   DEVELOPMENT

Protein transport in organelles: Dual targeting of proteins to mitochondria and chloroplasts

(2009) Chris Carrie et al.   FEBS Journal

SherLoc2: A High-Accuracy Hybrid Method for Predicting Subcellular Localization of Proteins

(2009) Sebastian Briesemeister et al.   JOURNAL OF PROTEOME RESEARCH

Diversity in Degrees of Freedom of Mitochondrial Transit Peptides

(2009) C. Staiger et al.   MOLECULAR BIOLOGY AND EVOLUTION

Dual Targeting to Mitochondria and Chloroplasts: Characterization of Thr–tRNA Synthetase Targeting Peptide

(2009) Anna-Karin Berglund et al.   Molecular Plant

Prediction of dual protein targeting to plant organelles

(2009) Jan Mitschke et al.   NEW PHYTOLOGIST

Exploring the Function-Location Nexus: Using Multiple Lines of Evidence in Defining the Subcellular Location of Plant Proteins

(2009) A. H. Millar et al.   PLANT CELL

Refining the Definition of Plant Mitochondrial Presequences through Analysis of Sorting Signals, N-Terminal Modifications, and Cleavage Motifs

(2009) S. Huang et al.   PLANT PHYSIOLOGY

RSLpred: an integrative system for predicting subcellular localization of rice proteins combining compositional and evolutionary information

(2009) Rakesh Kaundal et al.   PROTEOMICS

ESLpred2: improved method for predicting subcellular localization of eukaryotic proteins

(2008) Aarti Garg et al.   BMC BIOINFORMATICS

Type II NAD(P)H dehydrogenases are targeted to mitochondria and chloroplasts or peroxisomes inArabidopsis thaliana

(2008) Chris Carrie et al.   FEBS LETTERS

Pentatricopeptide repeat proteins: a socket set for organelle gene expression

(2008) C SCHMITZLINNEWEBER et al.   TRENDS IN PLANT SCIENCE