Epigenetics and chromatin dynamics: a review and a paradigm for functional disorders

Mo2068 Histone Deacetylase Dependent Regulation of Cytokine Secretion in Murine and Human Macrophages

(2015) Ronald Schilderink et al.   GASTROENTEROLOGY

998 Glucocorticoid Receptor Gene Methylation is a Potential Biomarker of Irritable Bowel Syndrome

(2015) Lin Chang et al.   GASTROENTEROLOGY

Sa2056 Supplementation of Ovalbumin-Sensitized Mice With Specific Non-Digestible Oligosaccharides During Pregnancy or Lactation Leads to Desensitization in the Offspring

(2015) Astrid Hogenkamp et al.   GASTROENTEROLOGY

Nitric oxide modifies chromatin to suppress ICAM-1 expression during colonic inflammation

(2012) Qingjie Li et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

Irritable Bowel Syndrome: Methods, Mechanisms, and Pathophysiology. Genetic epidemiology and pharmacogenetics in irritable bowel syndrome

(2012) Michael Camilleri et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

Krüppel-like Factor 11 Differentially Couples to Histone Acetyltransferase and Histone Methyltransferase Chromatin Remodeling Pathways to Transcriptionally Regulate Dopamine D2 Receptor in Neuronal Cells

(2012) Seungmae Seo et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Genome-wide “Re”-Modeling of Nucleosome Positions

(2011) Ronen Sadeh et al.   CELL

Control of the Embryonic Stem Cell State

(2011) Richard A. Young   CELL

Prediction of novel families of enzymes involved in oxidative and other complex modifications of bases in nucleic acids

(2011) Lakshminarayan M. Iyer et al.   CELL CYCLE

Regulation of chromatin by histone modifications

(2011) Andrew J Bannister et al.   CELL RESEARCH

ATP-dependent chromatin remodeling: genetics, genomics and mechanisms

(2011) Diana C Hargreaves et al.   CELL RESEARCH

DNA methylation: TET proteins—guardians of CpG islands?

(2011) Kristine Williams et al.   EMBO REPORTS

Timing is everything

(2011) Christopher Faulk et al.   Epigenetics

Environmental epigenetic transgenerational inheritance and somatic epigenetic mitotic stability

(2011)   Epigenetics

Neuronal Plasticity in the Cingulate Cortex of Rats Following Esophageal Acid Exposure in Early Life

(2011) Banani Banerjee et al.   GASTROENTEROLOGY

The Intestinal Microbiota Affect Central Levels of Brain-Derived Neurotropic Factor and Behavior in Mice

(2011) Premysl Bercik et al.   GASTROENTEROLOGY

Next-Generation Stool DNA Test Accurately Detects Colorectal Cancer and Large Adenomas

(2011) David A. Ahlquist et al.   GASTROENTEROLOGY

CpG islands and the regulation of transcription

(2011) A. M. Deaton et al.   GENES & DEVELOPMENT

Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells

(2011) Ryan Lister et al.   NATURE

Genome-wide mapping of 5-hydroxymethylcytosine in embryonic stem cells

(2011) William A. Pastor et al.   NATURE

Cancer epigenetics reaches mainstream oncology

(2011) Manuel Rodríguez-Paredes et al.   NATURE MEDICINE

Colonic butyrate- algesic or analgesic?

(2011) P. Kannampalli et al.   NEUROGASTROENTEROLOGY AND MOTILITY

Distinct microbial populations exist in the mucosa-associated microbiota of sub-groups of irritable bowel syndrome

(2011) G. C. Parkes et al.   NEUROGASTROENTEROLOGY AND MOTILITY

Predicting a Human Gut Microbiota's Response to Diet in Gnotobiotic Mice

(2011) J. J. Faith et al.   SCIENCE

Review article: molecular, pathological and therapeutic features of human enteric neuropathies

(2010) G. DI NARDO et al.   ALIMENTARY PHARMACOLOGY & THERAPEUTICS

The Language of Histone Crosstalk

(2010) Jung-Shin Lee et al.   CELL

Chromatin structure as a mediator of aging

(2010) Jason Feser et al.   FEBS LETTERS

CD206-Positive M2 Macrophages That Express Heme Oxygenase-1 Protect Against Diabetic Gastroparesis in Mice

(2010) Kyoung Moo Choi et al.   GASTROENTEROLOGY

Widespread and tissue specific age-related DNA methylation changes in mice

(2010) S. Maegawa et al.   GENOME RESEARCH

Loss of Kitlowprogenitors, reduced stem cell factor and high oxidative stress underlie gastric dysfunction in progeric mice

(2010) Ferenc Izbeki et al.   JOURNAL OF PHYSIOLOGY-LONDON

Short RNAs Are Transcribed from Repressed Polycomb Target Genes and Interact with Polycomb Repressive Complex-2

(2010) Aditi Kanhere et al.   MOLECULAR CELL

Comprehensive analysis of the chromatin landscape in Drosophila melanogaster

(2010) Peter V. Kharchenko et al.   NATURE

Brain function and chromatin plasticity

(2010) Catherine Dulac   NATURE

Discovery and characterization of chromatin states for systematic annotation of the human genome

(2010) Jason Ernst et al.   NATURE BIOTECHNOLOGY

Cyclin-dependent kinases regulate epigenetic gene silencing through phosphorylation of EZH2

(2010) Shuai Chen et al.   NATURE CELL BIOLOGY

Histone variants — ancient wrap artists of the epigenome

(2010) Paul B. Talbert et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

 -N-acetylglucosamine (O-GlcNAc) is part of the histone code

(2010) K. Sakabe et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular Signals of Epigenetic States

(2010) Roberto Bonasio et al.   SCIENCE

Repressive Transcription

(2010) M. G. Guenther et al.   SCIENCE

Genome-Wide Kinetics of Nucleosome Turnover Determined by Metabolic Labeling of Histones

(2010) R. B. Deal et al.   SCIENCE

Orphan CpG Islands Identify Numerous Conserved Promoters in the Mammalian Genome

(2010) Robert S. Illingworth et al.   PLoS Genetics

Epigenetic specification of centromeresThis paper is one of a selection of papers published in this Special Issue, entitled 29th Annual International Asilomar Chromatin and Chromosomes Conference, and has undergone the Journal’s usual peer review process.

(2009) Yamini Dalal   Biochemistry and Cell Biology

Shaping adult phenotypes through early life environments

(2009) Ian C.G. Weaver   BIRTH DEFECTS RESEARCH PART C-EMBRYO TODAY-REVIEWS

Understanding the Words of Chromatin Regulation

(2009) Jiang I. Wu et al.   CELL

The expression and crucial roles of BMP signaling in development of smooth muscle progenitor cells in the mouse embryonic gut

(2009) Shigeko Torihashi et al.   DIFFERENTIATION

Postinfectious Irritable Bowel Syndrome

(2009) Robin Spiller et al.   GASTROENTEROLOGY

5-HT4 Receptor-Mediated Neuroprotection and Neurogenesis in the Enteric Nervous System of Adult Mice

(2009) M.-T. Liu et al.   JOURNAL OF NEUROSCIENCE

Histone modifications at human enhancers reflect global cell-type-specific gene expression

(2009) Nathaniel D. Heintzman et al.   NATURE

The histone H1 family: specific members, specific functions?

(2008) Annalisa Izzo et al.   BIOLOGICAL CHEMISTRY

Heme Oxygenase-1 Protects Interstitial Cells of Cajal From Oxidative Stress and Reverses Diabetic Gastroparesis

(2008) Kyoung Moo Choi et al.   GASTROENTEROLOGY

Progenitors of Interstitial Cells of Cajal in the Postnatal Murine Stomach

(2008) Andrea Lorincz et al.   GASTROENTEROLOGY

Enteric Autoantibodies and Gut Motility Disorders

(2008) Purna Kashyap et al.   GASTROENTEROLOGY CLINICS OF NORTH AMERICA

Regulation of SRF/CArG-dependent gene transcription during chronic partial obstruction of murine small intestine

(2008) j. chen et al.   NEUROGASTROENTEROLOGY AND MOTILITY

Making copies of chromatin: the challenge of nucleosomal organization and epigenetic information

(2008) Armelle Corpet et al.   TRENDS IN CELL BIOLOGY