Multilayered chromatin analysis reveals E2f, Smad and Zfx as transcriptional regulators of histones

Differential expression of ZFX gene in gastric cancer

(2012) Parvaneh Nikpour et al.   JOURNAL OF BIOSCIENCES

hmChIP: a database and web server for exploring publicly available human and mouse ChIP-seq and ChIP-chip data

(2011) Li Chen et al.   BIOINFORMATICS

Mechanisms and functions of Tet protein-mediated 5-methylcytosine oxidation

(2011) H. Wu et al.   GENES & DEVELOPMENT

Genome-wide Analysis of Transcription Factor E2F1 Mutant Proteins Reveals That N- and C-terminal Protein Interaction Domains Do Not Participate in Targeting E2F1 to the Human Genome

(2011) Alina R. Cao et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The tumor suppressor role of CTCF

(2011) Francesco Paolo Fiorentino et al.   JOURNAL OF CELLULAR PHYSIOLOGY

The E2F transcription factor family regulates CENH3 expression in Arabidopsis thaliana

(2011) Stefan Heckmann et al.   PLANT JOURNAL

CBP/p300 and SIRT1 Are Involved in Transcriptional Regulation of S-Phase Specific Histone Genes

(2011) Hongpeng He et al.   PLoS One

A User's Guide to the Encyclopedia of DNA Elements (ENCODE)

(2011)   PLOS BIOLOGY

Genomewide characterization of non-polyadenylated RNAs

(2011) Li Yang et al.   GENOME BIOLOGY

Nodal Signaling Regulates the Bone Morphogenic Protein Pluripotency Pathway in Mouse Embryonic Stem Cells

(2010) Katherine E. Galvin et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Smad2 and Smad3 Are Redundantly Essential for the TGF- -Mediated Regulation of Regulatory T Plasticity and Th1 Development

(2010) T. Takimoto et al.   JOURNAL OF IMMUNOLOGY

Mediator and cohesin connect gene expression and chromatin architecture

(2010) Michael H. Kagey et al.   NATURE

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Integration of External Signaling Pathways with the Core Transcriptional Network in Embryonic Stem Cells

(2008) Xi Chen et al.   CELL

Patterns of cell signaling pathway activation that characterize mammary development

(2008) E. R. Andrechek et al.   DEVELOPMENT

E2F in vivo binding specificity: Comparison of consensus versus nonconsensus binding sites

(2008) A. Rabinovich et al.   GENOME RESEARCH

Metabolism and regulation of canonical histone mRNAs: life without a poly(A) tail

(2008) William F. Marzluff et al.   NATURE REVIEWS GENETICS

Model-based Analysis of ChIP-Seq (MACS)

(2008) Yong Zhang et al.   GENOME BIOLOGY