Capturing and cultivating single bacterial cells in gel microdroplets to obtain near-complete genomes

Nearly finished genomes produced using gel microdroplet culturing reveal substantial intraspecies genomic diversity within the human microbiome

(2013) M. S. Fitzsimons et al.   GENOME RESEARCH

Whole-genome sequences of Chlamydia trachomatis directly from clinical samples without culture

(2013) H. M. B. Seth-Smith et al.   GENOME RESEARCH

Insights into the phylogeny and coding potential of microbial dark matter

(2013) Christian Rinke et al.   NATURE

Generating whole bacterial genome sequences of low-abundance species from complex samples with IMS-MDA

(2013) Helena M B Seth-Smith et al.   Nature Protocols

Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum

(2013) J. S. McLean et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Artificial Polyploidy Improves Bacterial Single Cell Genome Recovery

(2012) Armand E. K. Dichosa et al.   PLoS One

Decontamination of MDA Reagents for Single Cell Whole Genome Amplification

(2011) Tanja Woyke et al.   PLoS One

Digital MDA for enumeration of total nucleic acid contamination

(2010) P. C. Blainey et al.   NUCLEIC ACIDS RESEARCH

One Bacterial Cell, One Complete Genome

(2010) Tanja Woyke et al.   PLoS One

Assembling the Marine Metagenome, One Cell at a Time

(2009) Tanja Woyke et al.   PLoS One

Whole Genome Amplification and De novo Assembly of Single Bacterial Cells

(2009) Sébastien Rodrigue et al.   PLoS One

A procedure for highly specific, sensitive, and unbiased whole-genome amplification

(2008) X. Pan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Flow-cytometric total bacterial cell counts as a descriptive microbiological parameter for drinking water treatment processes

(2007) Frederik Hammes et al.   WATER RESEARCH