Simultaneous all-optical manipulation and recording of neural circuit activity with cellular resolution in vivo

A Cortical Circuit for Gain Control by Behavioral State

(2014) Yu Fu et al.   CELL

Migrations and dynamics of the intertropical convergence zone

(2014) Tapio Schneider et al.   NATURE

All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins

(2014) Daniel R Hochbaum et al.   NATURE METHODS

Mapping brain activity at scale with cluster computing

(2014) Jeremy Freeman et al.   NATURE METHODS

Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy

(2014) Robert Prevedel et al.   NATURE METHODS

Simultaneous cellular-resolution optical perturbation and imaging of place cell firing fields

(2014) John Peter Rickgauer et al.   NATURE NEUROSCIENCE

Simultaneous imaging of neural activity in three dimensions

(2014) Sean Quirin et al.   Frontiers in Neural Circuits

Ultrasensitive fluorescent proteins for imaging neuronal activity

(2013) Tsai-Wen Chen et al.   NATURE

Targeting neurons and photons for optogenetics

(2013) Adam M Packer et al.   NATURE NEUROSCIENCE

Functional patterned multiphoton excitation deep inside scattering tissue

(2013) Eirini Papagiakoumou et al.   Nature Photonics

Control of a specific motor program by a small brain area in zebrafish

(2013) Otto Fajardo et al.   Frontiers in Neural Circuits

Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics

(2013) Jasper Akerboom et al.   Frontiers in Molecular Neuroscience

Optogenetic identification of striatal projection neuron subtypes during in vivo recordings

(2012) Alexxai V. Kravitz et al.   BRAIN RESEARCH

Dissection of Cortical Microcircuits by Single-Neuron Stimulation In Vivo

(2012) Alex C. Kwan et al.   CURRENT BIOLOGY

Division and subtraction by distinct cortical inhibitory networks in vivo

(2012) Nathan R. Wilson et al.   NATURE

Monkeys

(2012) Ken Liu   NATURE

Two-photon optogenetics of dendritic spines and neural circuits

(2012) Adam M Packer et al.   NATURE METHODS

Two-photon optogenetic toolbox for fast inhibition, excitation and bistable modulation

(2012) Rohit Prakash et al.   NATURE METHODS

Imaging Calcium in Neurons

(2012) Christine Grienberger et al.   NEURON

Neocortical excitation/inhibition balance in information processing and social dysfunction

(2011) Ofer Yizhar et al.   NATURE

A microprobe for parallel optical and electrical recordings from single neurons in vivo

(2011) Yoan LeChasseur et al.   NATURE METHODS

Optetrode: a multichannel readout for optogenetic control in freely moving mice

(2011) Polina Anikeeva et al.   NATURE NEUROSCIENCE

Optogenetics in Neural Systems

(2011) Ofer Yizhar et al.   NEURON

Three-dimensional imaging and photostimulation by remote-focusing and holographic light patterning

(2011) F. Anselmi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multi-array silicon probes with integrated optical fibers: light-assisted perturbation and recording of local neural circuits in the behaving animal

(2010) Sébastien Royer et al.   EUROPEAN JOURNAL OF NEUROSCIENCE

Fast Nonnegative Deconvolution for Spike Train Inference From Population Calcium Imaging

(2010) Joshua T. Vogelstein et al.   JOURNAL OF NEUROPHYSIOLOGY

Sensitivity to perturbations in vivo implies high noise and suggests rate coding in cortex

(2010) Michael London et al.   NATURE

From cudgel to scalpel: toward precise neural control with optogenetics

(2010) Simon Peron et al.   NATURE METHODS

Scanless two-photon excitation of channelrhodopsin-2

(2010) Eirini Papagiakoumou et al.   NATURE METHODS

Network mechanisms of theta related neuronal activity in hippocampal CA1 pyramidal neurons

(2010) Attila Losonczy et al.   NATURE NEUROSCIENCE

Modulation of Visual Responses by Behavioral State in Mouse Visual Cortex

(2010) Cristopher M. Niell et al.   NEURON

Simultaneous two-photon imaging and photo-stimulation with structured light illumination

(2010) Marco Dal Maschio et al.   OPTICS EXPRESS

Two-photon single-cell optogenetic control of neuronal activity by sculpted light

(2010) B. K. Andrasfalvy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators

(2009) Lin Tian et al.   NATURE METHODS

Long-term, high-resolution imaging in the mouse neocortex through a chronic cranial window

(2009) Anthony Holtmaat et al.   Nature Protocols

PINP: A New Method of Tagging Neuronal Populations for Identification during In Vivo Electrophysiological Recording

(2009) Susana Q. Lima et al.   PLoS One

Two-photon excitation of channelrhodopsin-2 at saturation

(2009) J. P. Rickgauer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Optogenetic dissection of neuronal circuits in zebrafish using viral gene transfer and the Tet system

(2009) Peixin Zhu   Frontiers in Neural Circuits

In Vitro and In Vivo Gene Therapy Vector Evolution via Multispecies Interbreeding and Retargeting of Adeno-Associated Viruses

(2008) D. Grimm et al.   JOURNAL OF VIROLOGY

Efficient subpixel image registration algorithms

(2008) Manuel Guizar-Sicairos et al.   OPTICS LETTERS

SLM microscopy: scanless two-photon imaging and photostimulation using spatial light modulators

(2008) Volodymyr Nikolenko   Frontiers in Neural Circuits

Sparse optical microstimulation in barrel cortex drives learned behaviour in freely moving mice

(2007) Daniel Huber et al.   NATURE