A general design strategy for protein-responsive riboswitches in mammalian cells

Artificial riboswitches for gene expression and replication control of DNA and RNA viruses

(2014) Patrick Ketzer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Synthetic circuits integrating logic and memory in living cells

(2013) Piro Siuti et al.   NATURE BIOTECHNOLOGY

Amplifying Genetic Logic Gates

(2013) J. Bonnet et al.   SCIENCE

Engineered riboswitches: Expanding researchers' toolbox with synthetic RNA regulators

(2012) Alexander Wittmann et al.   FEBS LETTERS

Engineering of ribozyme-based riboswitches for mammalian cells

(2012) Markus Wieland et al.   METHODS

Biomolecular computing systems: principles, progress and potential

(2012) Yaakov Benenson   NATURE REVIEWS GENETICS

Three-dimensionally designed protein-responsive RNA devices for cell signaling regulation

(2012) Shunnichi Kashida et al.   NUCLEIC ACIDS RESEARCH

Direct and specific chemical control of eukaryotic translation with a synthetic RNA–protein interaction

(2012) Stephen J. Goldfless et al.   NUCLEIC ACIDS RESEARCH

The ubiquitous hammerhead ribozyme

(2012) C. Hammann et al.   RNA

From gene switches to mammalian designer cells: present and future prospects

(2012) Simon Ausländer et al.   TRENDS IN BIOTECHNOLOGY

Structure-based Search Reveals Hammerhead Ribozymes in the Human Microbiome

(2011) Randi M. Jimenez et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Selection of tetracycline inducible self-cleaving ribozymes as synthetic devices for gene regulation in yeast

(2011) Alexander Wittmann et al.   Molecular BioSystems

Rational design of a small molecule-responsive intramer controlling transgene expression in mammalian cells

(2011) David Ausländer et al.   NUCLEIC ACIDS RESEARCH

Multi-Input RNAi-Based Logic Circuit for Identification of Specific Cancer Cells

(2011) Z. Xie et al.   SCIENCE

Identification of Hammerhead Ribozymes in All Domains of Life Reveals Novel Structural Variations

(2011) Jonathan Perreault et al.   PLoS Computational Biology

Rewiring Cells: Synthetic Biology as a Tool to Interrogate the Organizational Principles of Living Systems

(2010) Caleb J. Bashor et al.   Annual Review of Biophysics

Aptazyme-Mediated Regulation of 16S Ribosomal RNA

(2010) Markus Wieland et al.   CHEMISTRY & BIOLOGY

A ligand-dependent hammerhead ribozyme switch for controlling mammalian gene expression

(2010) Simon Ausländer et al.   Molecular BioSystems

A tunable dual-promoter integrator for targeting of cancer cells

(2010) Lior Nissim et al.   Molecular Systems Biology

Synthetic biology: applications come of age

(2010) Ahmad S. Khalil et al.   NATURE REVIEWS GENETICS

Genetic control of mammalian T-cell proliferation with synthetic RNA regulatory systems

(2010) Y. Y. Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reprogramming Cellular Behavior with RNA Controllers Responsive to Endogenous Proteins

(2010) S. J. Culler et al.   SCIENCE

Riboswitches and the RNA World

(2010) R. R. Breaker   Cold Spring Harbor Perspectives in Biology

Small-Molecule-Dependent Regulation of Transfer RNA in Bacteria

(2009) Barbara Berschneider et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Conditional RNA Interference Mediated by Allosteric Ribozyme

(2009) Deepak Kumar et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

A tunable synthetic mammalian oscillator

(2009) Marcel Tigges et al.   NATURE

Synthetic translational regulation by an L7Ae–kink-turn RNP switch

(2009) Hirohide Saito et al.   Nature Chemical Biology

Three-way RNA junctions with remote tertiary contacts: A recurrent and highly versatile fold

(2009) M. d. l. Pena et al.   RNA

Design Principles for Ligand-Sensing, Conformation-Switching Ribozymes

(2009) Xi Chen et al.   PLoS Computational Biology

Improved Aptazyme Design and In Vivo Screening Enable Riboswitching in Bacteria

(2008) Markus Wieland et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION