Metabolic engineering of Escherichia coli using synthetic small regulatory RNAs

Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters

(2012) Eilon Sharon et al.   NATURE BIOTECHNOLOGY

Strategy for directing combinatorial genome engineering in Escherichia coli

(2012) N. R. Sandoval et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Modular Engineering of l-Tyrosine Production in Escherichia coli

(2011) Darmawi Juminaga et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Small RNA RyhB as a potential tool used for metabolic engineering in Escherichia coli

(2011) Zhen Kang et al.   BIOTECHNOLOGY LETTERS

Engineering Biological Systems with Synthetic RNA Molecules

(2011) Joe C. Liang et al.   MOLECULAR CELL

Artificial trans -encoded small non-coding RNAs specifically silence the selected gene expression in bacteria

(2011) Shuai Man et al.   NUCLEIC ACIDS RESEARCH

An in silico model for identification of small RNAs in whole bacterial genomes: characterization of antisense RNAs in pathogenic Escherichia coli and Streptococcus agalactiae strains

(2011) Christophe Pichon et al.   NUCLEIC ACIDS RESEARCH

Versatile RNA-sensing transcriptional regulators for engineering genetic networks

(2011) J. B. Lucks et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Organization of Intracellular Reactions with Rationally Designed RNA Assemblies

(2011) C. J. Delebecque et al.   SCIENCE

Model-Driven Engineering of RNA Devices to Quantitatively Program Gene Expression

(2011) J. M. Carothers et al.   SCIENCE

Engineering Artificial Small RNAs for Conditional Gene Silencing in Escherichia coli

(2011) Vandana Sharma et al.   ACS Synthetic Biology

Metabolic engineering of Escherichia coli for the production of cadaverine: A five carbon diamine

(2010) Zhi-Gang Qian et al.   BIOTECHNOLOGY AND BIOENGINEERING

Mathematical modeling of translation initiation for the estimation of its efficiency to computationally design mRNA sequences with desired expression levels in prokaryotes

(2010) Dokyun Na et al.   BMC Systems Biology

Modeling and simulation of the main metabolism in Escherichia coli and its several single-gene knockout mutants with experimental verification

(2010) Tuty Kadir et al.   Microbial Cell Factories

Native-sized recombinant spider silk protein produced in metabolically engineered Escherichia coli results in a strong fiber

(2010) X.-X. Xia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Programming cells by multiplex genome engineering and accelerated evolution

(2009) Harris H. Wang et al.   NATURE

A molecular barcoded yeast ORF library enables mode-of-action analysis of bioactive compounds

(2009) Cheuk Hei Ho et al.   NATURE BIOTECHNOLOGY

Synthetic biology with RNA motifs

(2008) Hirohide Saito et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

Combinatorial pathway analysis for improved L-tyrosine production in Escherichia coli: Identification of enzymatic bottlenecks by systematic gene overexpression

(2008) Tina Lütke-Eversloh et al.   METABOLIC ENGINEERING

DNA barcodes: Genes, genomics, and bioinformatics

(2008) W. J. Kress et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Higher-Order Cellular Information Processing with Synthetic RNA Devices

(2008) M. N. Win et al.   SCIENCE